Information for 5-ARWTTAACCAGGA (Motif 12)

C G T A C T A G C G A T A G C T A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C T G G T C A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C T G C T A G A C G T A C G T C G T A C T G A C G A T A G C T A C G T
p-value:1e-6
log p-value:-1.480e+01
Information Content per bp:1.872
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.4 +/- 24.9bp
Average Position of motif in Background42.2 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ARWTTAACCAGGA---
GANGTTAACTAGTTTNN
 A C G T C G T A C T A G C G A T A G C T A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

DUX4/MA0468.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ARWTTAACCAGGA
TAATTTAATCA---
 A C G T C G T A C T A G C G A T A G C T A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C T G G T C A
G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ARWTTAACCAGGA
CTAATTTAATCAA--
 A C G T A C G T C G T A C T A G C G A T A G C T A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C T G G T C A
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ARWTTAACCAGGA
--GTTAACTAGN-
 C G T A C T A G C G A T A G C T A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C T G G T C A
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:ARWTTAACCAGGA---
------ANCAGGATGT
 C G T A C T A G C G A T A G C T A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Foxo1/MA0480.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ARWTTAACCAGGA
--TGTAAACAGGA
 C G T A C T A G C G A T A G C T A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C T G G T C A
A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ARWTTAACCAGGA
NWTAAYCYAATCAWN-
 A C G T A C G T A C G T C G T A C T A G C G A T A G C T A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C T G G T C A
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ARWTTAACCAGGA
---TTAATTAG--
 C G T A C T A G C G A T A G C T A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C T G G T C A
A C G T A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ARWTTAACCAGGA-
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T C G T A C T A G C G A T A G C T A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C T G G T C A A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ARWTTAACCAGGA
WWTRTAAACAVG-
 C G T A C T A G C G A T A G C T A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C T G G T C A
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G A C G T