Information for 1-TAMCTAGTTCTTACTC (Motif 1)

G A C T C G T A G T A C A G T C A G C T C G T A A C T G C G A T C G A T A G T C A C G T A C G T C G T A G T A C A G C T A G T C
Reverse Opposite:
C T A G C T G A C A T G C G A T G T C A C G T A C T A G C G T A C G T A G T A C A C G T C T G A C T A G C A T G A C G T C G T A
p-value:1e-13
log p-value:-3.056e+01
Information Content per bp:1.743
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 29.2bp
Average Position of motif in Background42.3 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TAMCTAGTTCTTACTC
GANGTTAACTAGTTTNN----
 A C G T A C G T A C G T A C G T A C G T G A C T C G T A G T A C A G T C A G C T C G T A A C T G C G A T C G A T A G T C A C G T A C G T C G T A G T A C A G C T A G T C
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T A C G T A C G T A C G T

Hoxd8/MA0910.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAMCTAGTTCTTACTC-
NAGCCATTAATTANTTA
 G A C T C G T A G T A C A G T C A G C T C G T A A C T G C G A T C G A T A G T C A C G T A C G T C G T A G T A C A G C T A G T C A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAMCTAGTTCTTACTC-
NAGCCATTAATTANTTA
 G A C T C G T A G T A C A G T C A G C T C G T A A C T G C G A T C G A T A G T C A C G T A C G T C G T A G T A C A G C T A G T C A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------TAMCTAGTTCTTACTC
AGCTGTTAACTAGCCGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A G T A C A G T C A G C T C G T A A C T G C G A T C G A T A G T C A C G T A C G T C G T A G T A C A G C T A G T C
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TAMCTAGTTCTTACTC
GTTAACTAGN--------
 A C G T A C G T G A C T C G T A G T A C A G T C A G C T C G T A A C T G C G A T C G A T A G T C A C G T A C G T C G T A G T A C A G C T A G T C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0062.1_Hoxb7/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TAMCTAGTTCTTACTC---
---GTAGTAATTAATGCAA
 G A C T C G T A G T A C A G T C A G C T C G T A A C T G C G A T C G A T A G T C A C G T A C G T C G T A G T A C A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

PH0055.1_Hoxa7_2/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TAMCTAGTTCTTACTC-
-TNCCATTAATTACTNC
 G A C T C G T A G T A C A G T C A G C T C G T A A C T G C G A T C G A T A G T C A C G T A C G T C G T A G T A C A G C T A G T C A C G T
A C G T A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C

PH0099.1_Lhx9/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TAMCTAGTTCTTACTC---
--CCCATTAATTAATCACC
 G A C T C G T A G T A C A G T C A G C T C G T A A C T G C G A T C G A T A G T C A C G T A C G T C G T A G T A C A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A G T C A T G C G A T C C T G A G A C T G A C T T G C A C T G A G A C T A C G T C T G A C T G A C G A T G A T C T G C A A T G C A G T C

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TAMCTAGTTCTTACTC-
-AGTAATTAATTACTTC
 G A C T C G T A G T A C A G T C A G C T C G T A A C T G C G A T C G A T A G T C A C G T A C G T C G T A G T A C A G C T A G T C A C G T
A C G T T C G A T C A G G A C T G C T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A A G T C A C G T G A C T A G T C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:TAMCTAGTTCTTACTC-
-------TRTTTACTTW
 G A C T C G T A G T A C A G T C A G C T C G T A A C T G C G A T C G A T A G T C A C G T A C G T C G T A G T A C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A