Information for 5-AAAGGCACARRGARWG (Motif 6)

C T G A C G T A C G T A A T C G A C T G T A G C G T C A A G T C C G T A C T G A C T A G A T C G T C G A C T G A C G A T A C T G
Reverse Opposite:
G T A C C G T A A G C T A G C T A T G C A G T C A G C T A C G T A C T G A C G T A C T G G T A C A T G C C G A T C G A T A G C T
p-value:1e-11
log p-value:-2.592e+01
Information Content per bp:1.763
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif22.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.5 +/- 29.5bp
Average Position of motif in Background47.6 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAAGGCACARRGARWG
---GGAACAAAGR---
 C T G A C G T A C G T A A T C G A C T G T A G C G T C A A G T C C G T A C T G A C T A G A T C G T C G A C T G A C G A T A C T G
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAAGGCACARRGARWG
---VRRACAAWGG---
 C T G A C G T A C G T A A T C G A C T G T A G C G T C A A G T C C G T A C T G A C T A G A T C G T C G A C T G A C G A T A C T G
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AAAGGCACARRGARWG
------ACAAAG----
 C T G A C G T A C G T A A T C G A C T G T A G C G T C A A G T C C G T A C T G A C T A G A T C G T C G A C T G A C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAAGGCACARRGARWG
CCAGGAACAG------
 C T G A C G T A C G T A A T C G A C T G T A G C G T C A A G T C C G T A C T G A C T A G A T C G T C G A C T G A C G A T A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAAGGCACARRGARWG-
AGAAGAACAAAGGACTA
 C T G A C G T A C G T A A T C G A C T G T A G C G T C A A G T C C G T A C T G A C T A G A T C G T C G A C T G A C G A T A C T G A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAAGGCACARRGARWG-
ATAAGAACAAAGGACTA
 C T G A C G T A C G T A A T C G A C T G T A G C G T C A A G T C C G T A C T G A C T A G A T C G T C G A C T G A C G A T A C T G A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAAGGCACARRGARWG
AAACAGACAAAGGAAT
 C T G A C G T A C G T A A T C G A C T G T A G C G T C A A G T C C G T A C T G A C T A G A T C G T C G A C T G A C G A T A C T G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AAAGGCACARRGARWG-----
AAANNGAAAGTGAAAGTAAAN
 C T G A C G T A C G T A A T C G A C T G T A G C G T C A A G T C C G T A C T G A C T A G A T C G T C G A C T G A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AAAGGCACARRGARWG
---AAAACAAAGG---
 C T G A C G T A C G T A A T C G A C T G T A G C G T C A A G T C C G T A C T G A C T A G A T C G T C G A C T G A C G A T A C T G
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AAAGGCACARRGARWG--
------ACAAAGGNBCCT
 C T G A C G T A C G T A A T C G A C T G T A G C G T C A A G T C C G T A C T G A C T A G A T C G T C G A C T G A C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T