Information for 4-AAGCAAGCTA (Motif 13)

C G T A G T C A C T A G A G T C C G T A C G T A A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C G T
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.911
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif26.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.9 +/- 19.3bp
Average Position of motif in Background47.6 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AAGCAAGCTA
---CAAGCTT
 C G T A G T C A C T A G A G T C C G T A C G T A A C T G A G T C A C G T C G T A
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGCAAGCTA
AAGGCAAGTGT
 A C G T C G T A G T C A C T A G A G T C C G T A C G T A A C T G A G T C A C G T C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAGCAAGCTA
ATGTAAACADGS--
 A C G T A C G T A C G T A C G T C G T A G T C A C T A G A G T C C G T A C G T A A C T G A G T C A C G T C G T A
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGCAAGCTA
GTAAACAA----
 A C G T A C G T C G T A G T C A C T A G A G T C C G T A C G T A A C T G A G T C A C G T C G T A
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGCAAGCTA---
AAGATAAGATAACA
 A C G T C G T A G T C A C T A G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C G T A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

FOXG1/MA0613.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGCAAGCTA
GTAAACAA----
 A C G T A C G T C G T A G T C A C T A G A G T C C G T A C G T A A C T G A G T C A C G T C G T A
C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGCAAGCTA
GTAAACAAT---
 A C G T A C G T C G T A G T C A C T A G A G T C C G T A C G T A A C T G A G T C A C G T C G T A
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGCAAGCTA-----
GAAAACTAGTTAACATC
 A C G T A C G T C G T A G T C A C T A G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAGCAAGCTA
TGTAAACAGGA--
 A C G T A C G T A C G T C G T A G T C A C T A G A G T C C G T A C G T A A C T G A G T C A C G T C G T A
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAGCAAGCTA--------
--ACATGCTACCTAATAC
 C G T A G T C A C T A G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C