Information for 6-TTKAACYAGGWSC (Motif 5)

A C G T A G C T A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C T G C G A T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A A G T C A G T C A C G T C T A G A T C G A C G T A C G T G T C A C T G A C G T A
p-value:1e-12
log p-value:-2.883e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.7 +/- 31.8bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTKAACYAGGWSC
GTTAACTAGN---
 A C G T A G C T A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C T G C G A T A T C G A G T C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTKAACYAGGWSC-
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C T G C G A T A T C G A G T C A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTKAACYAGGWSC
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C T G C G A T A T C G A G T C
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTKAACYAGGWSC
NTTTTACGAGN---
 A C G T A C G T A G C T A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C T G C G A T A T C G A G T C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTKAACYAGGWSC
ACTTAGTTAACTAAAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C T G C G A T A T C G A G T C
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTKAACYAGGWSC-
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A G C T A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C T G C G A T A T C G A G T C A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

LBX1/MA0618.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTKAACYAGGWSC
-TTAATTAG----
 A C G T A G C T A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C T G C G A T A T C G A G T C
A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTKAACYAGGWSC-
----NNCAGGTGCG
 A C G T A G C T A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C T G C G A T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTKAACYAGGWSC-----
-ATCCACAGGTGCGAAAA
 A C G T A G C T A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C T G C G A T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTKAACYAGGWSC
NNNGTAACTANGNNA
 A C G T A C G T A C G T A G C T A C G T C G T A C G T A A T G C A G T C C G T A A C T G A C T G C G A T A T C G A G T C
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A