Information for 8-CACTTGCTAATCC (Motif 7)

A G T C C G T A A G T C A C G T A C G T A C T G A G T C A G C T C G T A C G T A C G A T A G T C A G T C
Reverse Opposite:
C T A G A C T G G C T A A C G T A C G T C T G A A C T G A G T C C G T A C G T A A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.186e+01
Information Content per bp:1.941
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 7.4bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.70
Offset:5
Orientation:forward strand
Alignment:CACTTGCTAATCC
-----GCTAATCC
 A G T C C G T A A G T C A C G T A C G T A C T G A G T C A G C T C G T A C G T A C G A T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

PH0035.1_Gsc/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CACTTGCTAATCC-----
-AATCGTTAATCCCTTTA
 A G T C C G T A A G T C A C G T A C G T A C T G A G T C A G C T C G T A C G T A C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.67
Offset:5
Orientation:forward strand
Alignment:CACTTGCTAATCC--
-----GCTAATCCCC
 A G T C C G T A A G T C A C G T A C G T A C T G A G T C A G C T C G T A C G T A C G A T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CACTTGCTAATCC----
-GNNAGCTAATCCCCCN
 A G T C C G T A A G T C A C G T A C G T A C T G A G T C A G C T C G T A C G T A C G A T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CACTTGCTAATCC--
-----NYTAATCCYB
 A G T C C G T A A G T C A C G T A C G T A C T G A G T C A G C T C G T A C G T A C G A T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CACTTGCTAATCC------
--NTTGTTAATCCCTCTNN
 A G T C C G T A A G T C A C G T A C G T A C T G A G T C A G C T C G T A C G T A C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CACTTGCTAATCC-
-----CTTAATCCC
 A G T C C G T A A G T C A C G T A C G T A C T G A G T C A G C T C G T A C G T A C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CACTTGCTAATCC-
------YTAATCCY
 A G T C C G T A A G T C A C G T A C G T A C T G A G T C A G C T C G T A C G T A C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CACTTGCTAATCC--
-----CCTAATCCGC
 A G T C C G T A A G T C A C G T A C G T A C T G A G T C A G C T C G T A C G T A C G A T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CACTTGCTAATCC-
------TTAATCCC
 A G T C C G T A A G T C A C G T A C G T A C T G A G T C A G C T C G T A C G T A C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C