Information for 13-TTKCCGACAT (Motif 24)

A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T G C C G T A A C G T
Reverse Opposite:
C G T A A C G T A T C G A C G T G T A C A C T G A C T G G T C A C G T A C G T A
p-value:1e-3
log p-value:-8.422e+00
Information Content per bp:1.904
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.6 +/- 34.3bp
Average Position of motif in Background49.2 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTKCCGACAT--
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T G C C G T A A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0047.1_Hoxa11/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTKCCGACAT--
NNGTTTTACGACTTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T G C C G T A A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTKCCGACAT--
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T G C C G T A A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0076.1_Hoxd11/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTKCCGACAT--
ANNATTTTACGACNTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T G C C G T A A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTKCCGACAT
ATTTTCCATT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T G C C G T A A C G T
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTKCCGACAT
HTTTCCCASG-
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T G C C G T A A C G T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTKCCGACAT--
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T G C C G T A A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTKCCGACAT--
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T G C C G T A A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PB0115.1_Ehf_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TTKCCGACAT-
TAGTATTTCCGATCTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T G C C G T A A C G T A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTKCCGACAT
ATTTTCCATT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T G C C G T A A C G T
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T