Information for 3-CTGCGCAGAC (Motif 10)

A G T C A C G T A C T G A G T C C T A G A G T C C G T A A C T G G T C A T A G C
Reverse Opposite:
A T C G A C G T G T A C A C G T A C T G A G T C C T A G G T A C G T C A C T A G
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.853
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif125.4
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets36.7 +/- 23.6bp
Average Position of motif in Background54.9 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTGCGCAGAC----
----CCAGACRSVB
 A G T C A C G T A C T G A G T C C T A G A G T C C G T A A C T G G T C A T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGCGCAGAC--
-TGCGCAGGCGC
 A G T C A C G T A C T G A G T C C T A G A G T C C G T A A C T G G T C A T A G C A C G T A C G T
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGCGCAGAC-
-TGCCCAGNHW
 A G T C A C G T A C T G A G T C C T A G A G T C C G T A A C T G G T C A T A G C A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTGCGCAGAC--
CTGCGCATGCGC
 A G T C A C G T A C T G A G T C C T A G A G T C C G T A A C T G G T C A T A G C A C G T A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTGCGCAGAC--
----CCAGACAG
 A G T C A C G T A C T G A G T C C T A G A G T C C G T A A C T G G T C A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTGCGCAGAC--
----BCAGACWA
 A G T C A C G T A C T G A G T C C T A G A G T C C G T A A C T G G T C A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTGCGCAGAC
NNGCNCTGCGCGGC-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C T A G A G T C C G T A A C T G G T C A T A G C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T

NRF(NRF)/Promoter/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGCGCAGAC--
GTGCGCATGCGC
 A G T C A C G T A C T G A G T C C T A G A G T C C G T A A C T G G T C A T A G C A C G T A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTGCGCAGAC-
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C T A G A G T C C G T A A C T G G T C A T A G C A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTGCGCAGAC---
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C T A G A G T C C G T A A C T G G T C A T A G C A C G T A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A