p-value: | 1e-11 |
log p-value: | -2.724e+01 |
Information Content per bp: | 1.745 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.78% |
Number of Background Sequences with motif | 2.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 39.1 +/- 23.2bp |
Average Position of motif in Background | 68.2 +/- 8.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.17 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CMTGACMTGASTAGTT --TGACCTYA------ |
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CRE(bZIP)/Promoter/Homer
Match Rank: | 2 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CMTGACMTGASTAGTT CGGTGACGTCAC----- |
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Pax2/MA0067.1/Jaspar
Match Rank: | 3 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CMTGACMTGASTAGTT NCGTGACN--------- |
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HMBOX1/MA0895.1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | CMTGACMTGASTAGTT--- ---------ACTAGTTAAC |
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RORA/MA0071.1/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CMTGACMTGASTAGTT --TGACCTTGAT---- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CMTGACMTGASTAGTT --TGACCT-------- |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CMTGACMTGASTAGTT NNNNTGACCCGGCGCG-- |
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MAFG::NFE2L1/MA0089.1/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CMTGACMTGASTAGTT CATGAC---------- |
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TP53/MA0106.3/Jaspar
Match Rank: | 9 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CMTGACMTGASTAGTT AACATGCCCGGGCATGTC |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CMTGACMTGASTAGTT CCTCACCTG------- |
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