Information for 15-GTWCRTACTA (Motif 27)

A C T G A G C T C G T A A G T C C T G A A C G T C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T C G T A A G C T A C T G C G A T C T G A A G T C
p-value:1e-4
log p-value:-1.092e+01
Information Content per bp:1.904
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.0 +/- 22.9bp
Average Position of motif in Background61.7 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gmeb1/MA0615.1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTWCRTACTA---
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C T G A G C T C G T A A G T C C T G A A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTWCRTACTA---
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C T G A G C T C G T A A G T C C T G A A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTWCRTACTA----
GATAACATCCTAGTAG
 A C G T A C G T A C T G A G C T C G T A A G T C C T G A A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PB0096.1_Zfp187_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTWCRTACTA----
TTATGTACTAATAA
 A C T G A G C T C G T A A G T C C T G A A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

GMEB2/MA0862.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTWCRTACTA
TTACGTAA--
 A C T G A G C T C G T A A G T C C T G A A C G T C G T A A G T C A C G T C G T A
A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTWCRTACTA
BGCACGTA---
 A C G T A C T G A G C T C G T A A G T C C T G A A C G T C G T A A G T C A C G T C G T A
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTWCRTACTA-
-CACATTCCAT
 A C T G A G C T C G T A A G T C C T G A A C G T C G T A A G T C A C G T C G T A A C G T
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTWCRTACTA---
ATTTGCATACAATGG
 A C G T A C G T A C T G A G C T C G T A A G T C C T G A A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTWCRTACTA---
NNNTTTNTAATACNG
 A C G T A C G T A C T G A G C T C G T A A G T C C T G A A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

TEF/MA0843.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GTWCRTACTA
TATTACGTAACA
 A C G T A C G T A C T G A G C T C G T A A G T C C T G A A C G T C G T A A G T C A C G T C G T A
A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A