Information for 10-GCAATTTCAA (Motif 23)

A C T G A G T C C G T A C G T A A C G T C G A T A C G T A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.428e+01
Information Content per bp:1.946
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets38.0 +/- 18.7bp
Average Position of motif in Background50.4 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAATTTCAA----
TNGAATTTCATTNAN
 A C G T A C T G A G T C C G T A C G T A A C G T C G A T A C G T A G T C C G T A C T G A A C G T A C G T A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCAATTTCAA-
-CGGTTTCAAA
 A C T G A G T C C G T A C G T A A C G T C G A T A C G T A G T C C G T A C T G A A C G T
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCAATTTCAA-
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G A T A C G T A G T C C G T A C T G A A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCAATTTCAA
GGGAATTTCC-
 A C G T A C T G A G T C C G T A C G T A A C G T C G A T A C G T A G T C C G T A C T G A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCAATTTCAA
AGATGCAATCCC--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G A T A C G T A G T C C G T A C T G A
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCAATTTCAA----
AACAATTTCAGTGTT
 A C G T A C T G A G T C C G T A C G T A A C G T C G A T A C G T A G T C C G T A C T G A A C G T A C G T A C G T A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

Dlx4/MA0881.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAATTTCAA
CCAATTAC--
 A C T G A G T C C G T A C G T A A C G T C G A T A C G T A G T C C G T A C T G A
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GCAATTTCAA-
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G A T A C G T A G T C C G T A C T G A A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PH0061.1_Hoxb6/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCAATTTCAA---
NNNGTAATTACNNATA
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G A T A C G T A G T C C G T A C T G A A C G T A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAATTTCAA-
--NATTCAAAT
 A C T G A G T C C G T A C G T A A C G T C G A T A C G T A G T C C G T A C T G A A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T