Information for 11-GCATTTAAAGCTG (Motif 21)

A T C G A G T C G T C A A C G T A C G T A C G T G T C A G T C A C G T A A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A T G C
p-value:1e-7
log p-value:-1.696e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 27.8bp
Average Position of motif in Background34.1 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCATTTAAAGCTG
---TTTGAAACCG
 A T C G A G T C G T C A A C G T A C G T A C G T G T C A G T C A C G T A A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Hmx1/MA0896.1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCATTTAAAGCTG
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T A T C G A G T C G T C A A C G T A C G T A C G T G T C A G T C A C G T A A C T G A G T C A C G T A C T G
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCATTTAAAGCTG
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T A T C G A G T C G T C A A C G T A C G T A C G T G T C A G T C A C G T A A C T G A G T C A C G T A C T G
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCATTTAAAGCTG
CCTTTTATAGNC-
 A T C G A G T C G T C A A C G T A C G T A C G T G T C A G T C A C G T A A C T G A G T C A C G T A C T G
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCATTTAAAGCTG
NGCAATTAAA----
 A C G T A T C G A G T C G T C A A C G T A C G T A C G T G T C A G T C A C G T A A C T G A G T C A C G T A C T G
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCATTTAAAGCTG
-NATTCAAAT---
 A T C G A G T C G T C A A C G T A C G T A C G T G T C A G T C A C G T A A C T G A G T C A C G T A C T G
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCATTTAAAGCTG
GCACTTAA-----
 A T C G A G T C G T C A A C G T A C G T A C G T G T C A G T C A C G T A A C T G A G T C A C G T A C T G
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GCATTTAAAGCTG---
------HCAGCTGDTN
 A T C G A G T C G T C A A C G T A C G T A C G T G T C A G T C A C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCATTTAAAGCTG---
GTATTGACAGCTNNTT
 A T C G A G T C G T C A A C G T A C G T A C G T G T C A G T C A C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCATTTAAAGCTG
NNCAATTANN----
 A C G T A T C G A G T C G T C A A C G T A C G T A C G T G T C A G T C A C G T A A C T G A G T C A C G T A C T G
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T