Information for 7-CCCGCCACGT (Motif 16)

A G T C A T G C A G T C A C T G A G T C A G T C C G T A A G T C A T C G A G C T
Reverse Opposite:
C T G A A T G C T C A G A C G T A C T G C T A G G T A C C T A G A T C G A C T G
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.856
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif52.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets55.0 +/- 27.5bp
Average Position of motif in Background52.0 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCCACGT--
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G T C A C T G A G T C A G T C C G T A A G T C A T C G A G C T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Creb3l2/MA0608.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CCCGCCACGT--
---GCCACGTGT
 A G T C A T G C A G T C A C T G A G T C A G T C C G T A A G T C A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CCCGCCACGT-
---GCCACGTG
 A G T C A T G C A G T C A C T G A G T C A G T C C G T A A G T C A T C G A G C T A C G T
A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

E-box(bHLH)/Promoter/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCCGCCACGT--
CCGGTCACGTGA
 A G T C A T G C A G T C A C T G A G T C A G T C C G T A A G T C A T C G A G C T A C G T A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCCGCCACGT-
---NCCACGTG
 A G T C A T G C A G T C A C T G A G T C A G T C C G T A A G T C A T C G A G C T A C G T
A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCCGCCACGT--
--GGTCACGTGA
 A G T C A T G C A G T C A C T G A G T C A G T C C G T A A G T C A T C G A G C T A C G T A C G T
A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCCACGT
TTTCCCGCCMAV-
 A C G T A C G T A C G T A G T C A T G C A G T C A C T G A G T C A G T C C G T A A G T C A T C G A G C T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCCGCCACGT---
---KCCACGTGAC
 A G T C A T G C A G T C A C T G A G T C A G T C C G T A A G T C A T C G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

CREB3L1/MA0839.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCCGCCACGT-----
-ATGCCACGTCATCA
 A G T C A T G C A G T C A C T G A G T C A G T C C G T A A G T C A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCCACGT
TTCCCGCCWG--
 A C G T A C G T A G T C A T G C A G T C A C T G A G T C A G T C C G T A A G T C A T C G A G C T
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T