Information for 4-AGCTCASCAGCCTCCA (Motif 5)

C G T A A T C G A G T C C G A T A T G C G T C A A T C G A T G C G C T A C A T G A G T C A G T C A G C T T A G C A T G C C G T A
Reverse Opposite:
A C G T A T C G A C T G C T G A A C T G T A C G G T A C C G A T A T C G T A G C C A G T A T C G C G T A C T A G A T G C A C G T
p-value:1e-12
log p-value:-2.771e+01
Information Content per bp:1.692
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif37.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets46.2 +/- 24.2bp
Average Position of motif in Background48.6 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGCTCASCAGCCTCCA
CAGCC------------
 A C G T C G T A A T C G A G T C C G A T A T G C G T C A A T C G A T G C G C T A C A T G A G T C A G T C A G C T T A G C A T G C C G T A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---AGCTCASCAGCCTCCA
NNNACCTCATTATCNTN--
 A C G T A C G T A C G T C G T A A T C G A G T C C G A T A T G C G T C A A T C G A T G C G C T A C A T G A G T C A G T C A G C T T A G C A T G C C G T A
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.46
Offset:-2
Orientation:reverse strand
Alignment:--AGCTCASCAGCCTCCA
HCAGCTGDTN--------
 A C G T A C G T C G T A A T C G A G T C C G A T A T G C G T C A A T C G A T G C G C T A C A T G A G T C A G T C A G C T T A G C A T G C C G T A
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.46
Offset:4
Orientation:forward strand
Alignment:AGCTCASCAGCCTCCA-----
----TACGAGACTCCTCTAAC
 C G T A A T C G A G T C C G A T A T G C G T C A A T C G A T G C G C T A C A T G A G T C A G T C A G C T T A G C A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--AGCTCASCAGCCTCCA
AAATCACAGCA-------
 A C G T A C G T C G T A A T C G A G T C C G A T A T G C G T C A A T C G A T G C G C T A C A T G A G T C A G T C A G C T T A G C A T G C C G T A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.45
Offset:6
Orientation:reverse strand
Alignment:AGCTCASCAGCCTCCA
------BCAGACWA--
 C G T A A T C G A G T C C G A T A T G C G T C A A T C G A T G C G C T A C A T G A G T C A G T C A G C T T A G C A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.45
Offset:4
Orientation:forward strand
Alignment:AGCTCASCAGCCTCCA--
----CCCCCGCCCCCGCC
 C G T A A T C G A G T C C G A T A T G C G T C A A T C G A T G C G C T A C A T G A G T C A G T C A G C T T A G C A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

TFAP4/MA0691.1/Jaspar

Match Rank:8
Score:0.45
Offset:-3
Orientation:forward strand
Alignment:---AGCTCASCAGCCTCCA
AACAGCTGAT---------
 A C G T A C G T A C G T C G T A A T C G A G T C C G A T A T G C G T C A A T C G A T G C G C T A C A T G A G T C A G T C A G C T T A G C A T G C C G T A
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.45
Offset:1
Orientation:forward strand
Alignment:AGCTCASCAGCCTCCA
-GCTCCG---------
 C G T A A T C G A G T C C G A T A T G C G T C A A T C G A T G C G C T A C A T G A G T C A G T C A G C T T A G C A T G C C G T A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.44
Offset:-3
Orientation:forward strand
Alignment:---AGCTCASCAGCCTCCA
AACAGCTG-----------
 A C G T A C G T A C G T C G T A A T C G A G T C C G A T A T G C G T C A A T C G A T G C G C T A C A T G A G T C A G T C A G C T T A G C A T G C C G T A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T