Information for 4-GGGGAACGTACTG (Motif 4)

C T A G A C T G A T C G C T A G C G T A C G T A A G T C A C T G C G A T G T C A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A C T A G A C G T C G T A A G T C A C T G A C G T A C G T A G T C A T G C A G T C A G T C
p-value:1e-12
log p-value:-2.899e+01
Information Content per bp:1.846
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.3 +/- 14.0bp
Average Position of motif in Background40.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGGGAACGTACTG
--BGCACGTA---
 C T A G A C T G A T C G C T A G C G T A C G T A A G T C A C T G C G A T G T C A A G T C A C G T A C T G
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGGGAACGTACTG---
-VAGRACAKNCTGTBC
 C T A G A C T G A T C G C T A G C G T A C G T A A G T C A C T G C G A T G T C A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

Hes2/MA0616.1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGGGAACGTACTG
TAACGACACGTGC--
 A C G T A C G T C T A G A C T G A T C G C T A G C G T A C G T A A G T C A C T G C G A T G T C A A G T C A C G T A C T G
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGGGAACGTACTG---
-VAGRACAKWCTGTYC
 C T A G A C T G A T C G C T A G C G T A C G T A A G T C A C T G C G A T G T C A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGGGAACGTACTG
RGGGCACTAACY-
 C T A G A C T G A T C G C T A G C G T A C G T A A G T C A C T G C G A T G T C A A G T C A C G T A C T G
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGGGAACGTACTG
TGGGGA--------
 A C G T C T A G A C T G A T C G C T A G C G T A C G T A A G T C A C T G C G A T G T C A A G T C A C G T A C T G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGGGAACGTACTG---
-AAGAACATWHTGTTC
 C T A G A C T G A T C G C T A G C G T A C G T A A G T C A C T G C G A T G T C A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGGGAACGTACTG
---GCACGTAY--
 C T A G A C T G A T C G C T A G C G T A C G T A A G T C A C T G C G A T G T C A A G T C A C G T A C T G
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGGGAACGTACTG-----
-GGGAACATTGTGTTCCC
 C T A G A C T G A T C G C T A G C G T A C G T A A G T C A C T G C G A T G T C A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGGGAACGTACTG----
-NAGNACANNNTGTNCT
 C T A G A C T G A T C G C T A G C G T A C G T A A G T C A C T G C G A T G T C A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T