Information for 5-TCAACACAAS (Motif 20)

C A G T G A T C C G T A C G T A T G A C C G T A A G T C G T C A G T C A T A G C
Reverse Opposite:
A T C G A C G T A C G T A C T G A C G T A C T G A C G T A C G T C T A G G T C A
p-value:1e-6
log p-value:-1.501e+01
Information Content per bp:1.756
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif410.9
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets50.9 +/- 23.6bp
Average Position of motif in Background47.6 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TCAACACAAS---
ATATCAAAACAAAACA
 A C G T A C G T A C G T C A G T G A T C C G T A C G T A T G A C C G T A A G T C G T C A G T C A T A G C A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TCAACACAAS---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T C A G T G A T C C G T A C G T A T G A C C G T A A G T C G T C A G T C A T A G C A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCAACACAAS--
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A C G T C A G T G A T C C G T A C G T A T G A C C G T A A G T C G T C A G T C A T A G C A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCAACACAAS--
--RNAACAATGG
 C A G T G A T C C G T A C G T A T G A C C G T A A G T C G T C A G T C A T A G C A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCAACACAAS--
ATGTCACAACAACAC
 A C G T A C G T A C G T C A G T G A T C C G T A C G T A T G A C C G T A A G T C G T C A G T C A T A G C A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCAACACAAS--
--AAAACAAAGG
 C A G T G A T C C G T A C G T A T G A C C G T A A G T C G T C A G T C A T A G C A C G T A C G T
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCAACACAAS-
NWAACCACADNN
 A C G T C A G T G A T C C G T A C G T A T G A C C G T A A G T C G T C A G T C A T A G C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCAACACAAS
-GTAAACAAT
 C A G T G A T C C G T A C G T A T G A C C G T A A G T C G T C A G T C A T A G C
A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCAACACAAS
--NANANAC-
 C A G T G A T C C G T A C G T A T G A C C G T A A G T C G T C A G T C A T A G C
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCAACACAAS
AAACCACAGC
 C A G T G A T C C G T A C G T A T G A C C G T A A G T C G T C A G T C A T A G C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C