Information for 5-TTGTCSWACWSYASSA (Motif 6)

A C G T A C G T A C T G A C G T G T A C A T G C C G A T C G T A A G T C C G T A A T G C A G T C C T G A A T G C T A C G C G T A
Reverse Opposite:
A C G T A T C G A T C G A G C T C T A G A T C G C G A T A C T G A C G T C G T A A T C G A C T G C G T A G T A C C G T A G T C A
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.817
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.8 +/- 16.6bp
Average Position of motif in Background53.2 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTCSWACWSYASSA
GNNATTTGTCGTAANN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T G C C G A T C G T A A G T C C G T A A T G C A G T C C T G A A T G C T A C G C G T A
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTGTCSWACWSYASSA
CTCATTGTC-----------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T G C C G A T C G T A A G T C C G T A A T G C A G T C C T G A A T G C T A C G C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTGTCSWACWSYASSA
CCATTGTTNY---------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T G C C G A T C G T A A G T C C G T A A T G C A G T C C T G A A T G C T A C G C G T A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TTGTCSWACWSYASSA
TCTTTGGCGTACCCTAA--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T G C C G A T C G T A A G T C C G T A A T G C A G T C C T G A A T G C T A C G C G T A
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TTGTCSWACWSYASSA
ATTGCGCAAC-------
 A C G T A C G T A C G T A C T G A C G T G T A C A T G C C G A T C G T A A G T C C G T A A T G C A G T C C T G A A T G C T A C G C G T A
T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TTGTCSWACWSYASSA
CCATTGTTTT---------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T G C C G A T C G T A A G T C C G T A A T G C A G T C C T G A A T G C T A C G C G T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTGTCSWACWSYASSA
CTTTGT------------
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T G C C G A T C G T A A G T C C G T A A T G C A G T C C T G A A T G C T A C G C G T A
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------TTGTCSWACWSYASSA
ANNTCCATTGTTCNNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T G C C G A T C G T A A G T C C G T A A T G C A G T C C T G A A T G C T A C G C G T A
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TTGTCSWACWSYASSA
CCWTTGTY-----------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T G C C G A T C G T A A G T C C G T A A T G C A G T C C T G A A T G C T A C G C G T A
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TTGTCSWACWSYASSA
CCWTTGTYYB---------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T G C C G A T C G T A A G T C C G T A A T G C A G T C C T G A A T G C T A C G C G T A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T