Information for 9-TVCCGGVCAGCCC (Motif 20)

A C G T T C G A A G T C A G T C A C T G A T C G T C G A A G T C C G T A A C T G G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C A C G T A C T G A C G T A T G C G T A C A C T G A C T G A C G T C G T A
p-value:1e-6
log p-value:-1.499e+01
Information Content per bp:1.853
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.4 +/- 18.1bp
Average Position of motif in Background31.5 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TVCCGGVCAGCCC--
-GCCGCGCAGTGCGT
 A C G T T C G A A G T C A G T C A C T G A T C G T C G A A G T C C G T A A C T G G T A C A G T C A G T C A C G T A C G T
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TVCCGGVCAGCCC
GGTCCCGCCC-----
 A C G T A C G T A C G T T C G A A G T C A G T C A C T G A T C G T C G A A G T C C G T A A C T G G T A C A G T C A G T C
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TVCCGGVCAGCCC--
TCCCAGMCRAGCCCC
 A C G T T C G A A G T C A G T C A C T G A T C G T C G A A G T C C G T A A C T G G T A C A G T C A G T C A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TVCCGGVCAGCCC
-----CACAGN--
 A C G T T C G A A G T C A G T C A C T G A T C G T C G A A G T C C G T A A C T G G T A C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TVCCGGVCAGCCC
TTTCCCGCCMAV---
 A C G T A C G T A C G T T C G A A G T C A G T C A C T G A T C G T C G A A G T C C G T A A C T G G T A C A G T C A G T C
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TVCCGGVCAGCCC--
---GGCCCCGCCCCC
 A C G T T C G A A G T C A G T C A C T G A T C G T C G A A G T C C G T A A C T G G T A C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TVCCGGVCAGCCC-
------BCAGACWA
 A C G T T C G A A G T C A G T C A C T G A T C G T C G A A G T C C G T A A C T G G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TVCCGGVCAGCCC
NNTTCCCGCCC-----
 A C G T A C G T A C G T A C G T T C G A A G T C A G T C A C T G A T C G T C G A A G T C C G T A A C T G G T A C A G T C A G T C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TVCCGGVCAGCCC
-------CAGCC-
 A C G T T C G A A G T C A G T C A C T G A T C G T C G A A G T C C G T A A C T G G T A C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TVCCGGVCAGCCC--
---CNGTCACGCCAC
 A C G T T C G A A G T C A G T C A C T G A T C G T C G A A G T C C G T A A C T G G T A C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C