Information for 1-TCCATTTGTA (Motif 9)

A C G T A T G C A G T C C G T A A C G T C A G T A C G T C A T G A C G T C T G A
Reverse Opposite:
A G C T G T C A G T A C C G T A G T C A C G T A C G A T A C T G T A C G G T C A
p-value:1e-9
log p-value:-2.282e+01
Information Content per bp:1.816
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif4.52%
Number of Background Sequences with motif234.0
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets39.5 +/- 24.4bp
Average Position of motif in Background48.6 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCCATTTGTA
AACCTTATAT-
 A C G T A C G T A T G C A G T C C G T A A C G T C A G T A C G T C A T G A C G T C T G A
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCCATTTGTA--
TCTATTTTTAGA
 A C G T A T G C A G T C C G T A A C G T C A G T A C G T C A T G A C G T C T G A A C G T A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCCATTTGTA--
TCTATTTATAGN
 A C G T A T G C A G T C C G T A A C G T C A G T A C G T C A T G A C G T C T G A A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TCCATTTGTA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A A C G T C A G T A C G T C A T G A C G T C T G A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TCCATTTGTA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A A C G T C A G T A C G T C A T G A C G T C T G A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCCATTTGTA
-CCATATGT-
 A C G T A T G C A G T C C G T A A C G T C A G T A C G T C A T G A C G T C T G A
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCCATTTGTA
ACCATATGTT
 A C G T A T G C A G T C C G T A A C G T C A G T A C G T C A T G A C G T C T G A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCCATTTGTA---
-CCTTTTATAGNC
 A C G T A T G C A G T C C G T A A C G T C A G T A C G T C A T G A C G T C T G A A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCCATTTGTA--
GCTATTTATAGC
 A C G T A T G C A G T C C G T A A C G T C A G T A C G T C A T G A C G T C T G A A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCCATTTGTA----
TTCTATTTTTAGNNN
 A C G T A C G T A T G C A G T C C G T A A C G T C A G T A C G T C A T G A C G T C T G A A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T