Information for 2-AARGTRGGARAGW (Motif 4)

C T G A C G T A C T A G A C T G A C G T C T A G A C T G A C T G C G T A C T G A C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T A G C T A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C G T A G C T
p-value:1e-11
log p-value:-2.754e+01
Information Content per bp:1.872
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.7 +/- 16.4bp
Average Position of motif in Background50.2 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EOMES/MA0800.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AARGTRGGARAGW
AAGGTGTGAAAAT
 C T G A C G T A C T A G A C T G A C G T C T A G A C T G A C T G C G T A C T G A C G T A A C T G C G T A
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AARGTRGGARAGW
-AGGTGTGAAA--
 C T G A C G T A C T A G A C T G A C G T C T A G A C T G A C T G C G T A C T G A C G T A A C T G C G T A
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AARGTRGGARAGW
AAGGTGTGAA---
 C T G A C G T A C T A G A C T G A C G T C T A G A C T G A C T G C G T A C T G A C G T A A C T G C G T A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AARGTRGGARAGW-
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T C T G A C G T A C T A G A C T G A C G T C T A G A C T G A C T G C G T A C T G A C G T A A C T G C G T A A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AARGTRGGARAGW
--CSTGGGAAAD-
 C T G A C G T A C T A G A C T G A C G T C T A G A C T G A C T G C G T A C T G A C G T A A C T G C G T A
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AARGTRGGARAGW
AAGGTGTGAAA--
 C T G A C G T A C T A G A C T G A C G T C T A G A C T G A C T G C G T A C T G A C G T A A C T G C G T A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AARGTRGGARAGW
-GGGCGGGAAGG-
 C T G A C G T A C T A G A C T G A C G T C T A G A C T G A C T G C G T A C T G A C G T A A C T G C G T A
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AARGTRGGARAGW
--GGCGGGAARN-
 C T G A C G T A C T A G A C T G A C G T C T A G A C T G A C T G C G T A C T G A C G T A A C T G C G T A
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AARGTRGGARAGW
-AGGTGTGA----
 C T G A C G T A C T A G A C T G A C G T C T A G A C T G A C T G C G T A C T G A C G T A A C T G C G T A
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AARGTRGGARAGW
-AGGTGTGA----
 C T G A C G T A C T A G A C T G A C G T C T A G A C T G A C T G C G T A C T G A C G T A A C T G C G T A
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T