Information for 1-ATCMAAATTTTGA (Motif 2)

T C G A C G A T A G T C G T C A C T G A C G T A C T G A A G C T G A C T C G A T C A G T A C T G C G T A
Reverse Opposite:
C G A T A G T C G T C A C G T A C G T A C T G A A G C T G A C T G A C T C A G T C T A G C G T A A C G T
p-value:1e-12
log p-value:-2.860e+01
Information Content per bp:1.779
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif40.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets46.5 +/- 20.5bp
Average Position of motif in Background46.3 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATCMAAATTTTGA--
NNCTNAATTATGANN
 T C G A C G A T A G T C G T C A C T G A C G T A C T G A A G C T G A C T C G A T C A G T A C T G C G T A A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

MF0008.1_MADS_class/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATCMAAATTTTGA
--CCATATATGG-
 T C G A C G A T A G T C G T C A C T G A C G T A C T G A A G C T G A C T C G A T C A G T A C T G C G T A
A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATCMAAATTTTGA-
TTCCATATATGGAA
 T C G A C G A T A G T C G T C A C T G A C G T A C T G A A G C T G A C T C G A T C A G T A C T G C G T A A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATCMAAATTTTGA
ATTATGCTAATTT---
 A C G T A C G T A C G T T C G A C G A T A G T C G T C A C T G A C G T A C T G A A G C T G A C T C G A T C A G T A C T G C G T A
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATCMAAATTTTGA
ATATGCAAATNNN--
 A C G T A C G T T C G A C G A T A G T C G T C A C T G A C G T A C T G A A G C T G A C T C G A T C A G T A C T G C G T A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATCMAAATTTTGA
TTATGCAAAT-----
 A C G T A C G T T C G A C G A T A G T C G T C A C T G A C G T A C T G A A G C T G A C T C G A T C A G T A C T G C G T A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATCMAAATTTTGA
TTATGCAAATTA---
 A C G T A C G T T C G A C G A T A G T C G T C A C T G A C G T A C T G A A G C T G A C T C G A T C A G T A C T G C G T A
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATCMAAATTTTGA
TATGCAAAT-----
 A C G T T C G A C G A T A G T C G T C A C T G A C G T A C T G A A G C T G A C T C G A T C A G T A C T G C G T A
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATCMAAATTTTGA
ATATGCAAAT-----
 A C G T A C G T T C G A C G A T A G T C G T C A C T G A C G T A C T G A A G C T G A C T C G A T C A G T A C T G C G T A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATCMAAATTTTGA
CATCCAGATGTTC-
 A C G T T C G A C G A T A G T C G T C A C T G A C G T A C T G A A G C T G A C T C G A T C A G T A C T G C G T A
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T