Information for 1-ACWGAGCAACAGGATT (Motif 1)

C G T A A T G C C G T A C T A G C G T A C A T G A G T C C G T A C G T A G A T C C G T A A C T G A C T G C T G A C G A T A C G T
Reverse Opposite:
T C G A G C T A G A C T A G T C A G T C C G A T C T A G A C G T C G A T A C T G G A T C C G A T A G T C C G A T A T C G A C G T
p-value:1e-14
log p-value:-3.249e+01
Information Content per bp:1.765
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 21.2bp
Average Position of motif in Background38.8 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT1/MA0743.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ACWGAGCAACAGGATT--
---GAGCAACAGGTGGTT
 C G T A A T G C C G T A C T A G C G T A C A T G A G T C C G T A C G T A G A T C C G T A A C T G A C T G C T G A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ACWGAGCAACAGGATT
---ATGCAACAGGTGG
 C G T A A T G C C G T A C T A G C G T A C A T G A G T C C G T A C G T A G A T C C G T A A C T G A C T G C T G A C G A T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:7
Orientation:forward strand
Alignment:ACWGAGCAACAGGATT-
-------AACAGGAAGT
 C G T A A T G C C G T A C T A G C G T A C A T G A G T C C G T A C G T A G A T C C G T A A C T G A C T G C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACWGAGCAACAGGATT
CCGCATAGCAACGGA---
 A C G T A C G T C G T A A T G C C G T A C T A G C G T A C A T G A G T C C G T A C G T A G A T C C G T A A C T G A C T G C T G A C G A T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACWGAGCAACAGGATT
SCCTAGCAACAG----
 C G T A A T G C C G T A C T A G C G T A C A T G A G T C C G T A C G T A G A T C C G T A A C T G A C T G C T G A C G A T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACWGAGCAACAGGATT
TAGTGAACAATAGATTT
 A C G T C G T A A T G C C G T A C T A G C G T A C A T G A G T C C G T A C G T A G A T C C G T A A C T G A C T G C T G A C G A T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:ACWGAGCAACAGGATT-
-------ANCAGGATGT
 C G T A A T G C C G T A C T A G C G T A C A T G A G T C C G T A C G T A G A T C C G T A A C T G A C T G C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACWGAGCAACAGGATT
---GAACAATGG----
 C G T A A T G C C G T A C T A G C G T A C A T G A G T C C G T A C G T A G A T C C G T A A C T G A C T G C T G A C G A T A C G T
A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACWGAGCAACAGGATT
---GAACAATGGN---
 C G T A A T G C C G T A C T A G C G T A C A T G A G T C C G T A C G T A G A T C C G T A A C T G A C T G C T G A C G A T A C G T
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:ACWGAGCAACAGGATT
-------CACAGN---
 C G T A A T G C C G T A C T A G C G T A C A T G A G T C C G T A C G T A G A T C C G T A A C T G A C T G C T G A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T