Information for 2-AGAACTCCAAAGC (Motif 2)

C G T A A C T G C G T A C G T A A G T C C G A T G T A C A G T C G C T A C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T C A G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C A C G T
p-value:1e-11
log p-value:-2.693e+01
Information Content per bp:1.943
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 26.8bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGAACTCCAAAGC
---ACATCAAAGG
 C G T A A C T G C G T A C G T A A G T C C G A T G T A C A G T C G C T A C G T A C G T A A C T G A G T C
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGAACTCCAAAGC
---ACWTCAAAGG
 C G T A A C T G C G T A C G T A A G T C C G A T G T A C A G T C G C T A C G T A C G T A A C T G A G T C
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAACTCCAAAGC--
-AAAGATCAAAGGAA
 C G T A A C T G C G T A C G T A A G T C C G A T G T A C A G T C G C T A C G T A C G T A A C T G A G T C A C G T A C G T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGAACTCCAAAGC--
---ACATCAAAGGNA
 C G T A A C T G C G T A C G T A A G T C C G A T G T A C A G T C G C T A C G T A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AGAACTCCAAAGC
NATTTAAGTACTTNAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C C G A T G T A C A G T C G C T A C G T A C G T A A C T G A G T C
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAACTCCAAAGC
-AAAGATCAAAGG
 C G T A A C T G C G T A C G T A A G T C C G A T G T A C A G T C G C T A C G T A C G T A A C T G A G T C
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------AGAACTCCAAAGC
TATCATTAGAACGCT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C C G A T G T A C A G T C G C T A C G T A C G T A A C T G A G T C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGAACTCCAAAGC---
-AAAGATCAAAGGGTT
 C G T A A C T G C G T A C G T A A G T C C G A T G T A C A G T C G C T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------AGAACTCCAAAGC
ACTCCAAGTACTTGGAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C C G A T G T A C A G T C G C T A C G T A C G T A A C T G A G T C
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGAACTCCAAAGC
-AAACCGCAAA--
 C G T A A C T G C G T A C G T A A G T C C G A T G T A C A G T C G C T A C G T A C G T A A C T G A G T C
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T