Information for 2-GCCRSSCACAGCY (Motif 7)

A C T G A G T C A G T C C T G A A T C G A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G C T
Reverse Opposite:
C T G A A C T G A G T C A C G T A C T G A C G T A C T G A T C G A T G C A G C T A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.784e+01
Information Content per bp:1.883
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif5.08%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.3 +/- 25.0bp
Average Position of motif in Background39.2 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:GCCRSSCACAGCY
------CACAGN-
A C T G A G T C A G T C C T G A A T C G A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCCRSSCACAGCY
-CCAGGAACAG--
A C T G A G T C A G T C C T G A A T C G A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G C T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCRSSCACAGCY-
GCCGCGCAGTGCGT
A C T G A G T C A G T C C T G A A T C G A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G C T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCRSSCACAGCY
--AAACCACAGAN
A C T G A G T C A G T C C T G A A T C G A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G C T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCRSSCACAGCY
GGCCACRCCCMK--
A C G T A C T G A G T C A G T C C T G A A T C G A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G C T
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCRSSCACAGCY
--AAACCACAGC-
A C T G A G T C A G T C C T G A A T C G A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G C T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCCRSSCACAGCY--
---GGCCACACCCAN
A C T G A G T C A G T C C T G A A T C G A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCCRSSCACAGCY-
------AACAGCTG
A C T G A G T C A G T C C T G A A T C G A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCRSSCACAGCY
YCCGCCCACGCN-
A C T G A G T C A G T C C T G A A T C G A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G C T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCRSSCACAGCY
GCCACACCCA---
A C T G A G T C A G T C C T G A A T C G A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G C T
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T