Information for 2-YTTTARGCCTTTGSTG (Motif 2)

A G T C A G C T A C G T A C G T C G T A C T A G C T A G A G T C A G T C A C G T A C G T A C G T A C T G A T C G C A G T A C T G
Reverse Opposite:
G T A C G C T A A T G C T A G C C G T A C G T A C G T A C T A G C T A G A G T C A G T C C G A T T C G A C G T A C T G A C T A G
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.724
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif8.47%
Number of Background Sequences with motif27.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets56.6 +/- 20.1bp
Average Position of motif in Background49.2 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:YTTTARGCCTTTGSTG
----TGACCTTTNCNT
 A G T C A G C T A C G T A C G T C G T A C T A G C T A G A G T C A G T C A C G T A C G T A C G T A C T G A T C G C A G T A C T G
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:YTTTARGCCTTTGSTG-
-------CCTTTGAWGT
 A G T C A G C T A C G T A C G T C G T A C T A G C T A G A G T C A G T C A C G T A C G T A C G T A C T G A T C G C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:YTTTARGCCTTTGSTG
--CNAGGCCT------
 A G T C A G C T A C G T A C G T C G T A C T A G C T A G A G T C A G T C A C G T A C G T A C G T A C T G A T C G C A G T A C T G
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:YTTTARGCCTTTGSTG-
-------CCTTTGATGT
 A G T C A G C T A C G T A C G T C G T A C T A G C T A G A G T C A G T C A C G T A C G T A C G T A C T G A T C G C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:YTTTARGCCTTTGSTG
TTTTACGACTTTCCAT
 A G T C A G C T A C G T A C G T C G T A C T A G C T A G A G T C A G T C A C G T A C G T A C G T A C T G A T C G C A G T A C T G
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:YTTTARGCCTTTGSTG-
-----TNCCTTTGATGT
 A G T C A G C T A C G T A C G T C G T A C T A G C T A G A G T C A G T C A C G T A C G T A C G T A C T G A T C G C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:YTTTARGCCTTTGSTG---
-----TNCCTTTGATCTTN
 A G T C A G C T A C G T A C G T C G T A C T A G C T A G A G T C A G T C A C G T A C G T A C G T A C T G A T C G C A G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:forward strand
Alignment:YTTTARGCCTTTGSTG
-------CCWTTGTY-
 A G T C A G C T A C G T A C G T C G T A C T A G C T A G A G T C A G T C A C G T A C G T A C G T A C T G A T C G C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----YTTTARGCCTTTGSTG
TGACCTTTTGACCTTT----
 A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C G T C G T A C T A G C T A G A G T C A G T C A C G T A C G T A C G T A C T G A T C G C A G T A C T G
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:YTTTARGCCTTTGSTG---
----TGGACTTTGNNCTCN
 A G T C A G C T A C G T A C G T C G T A C T A G C T A G A G T C A G T C A C G T A C G T A C G T A C T G A T C G C A G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T