Information for 4-ATCTTAAGGC (Motif 10)

C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C G T
p-value:1e-2
log p-value:-6.027e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.0 +/- 0.0bp
Average Position of motif in Background22.4 +/- 7.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATCTTAAGGC-
NGCCTNAGGCN
 C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATCTTAAGGC-
AGCCTCAGGCA
 C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

PH0056.1_Hoxa9/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ATCTTAAGGC---
ANTAATTTTATGGCCGN
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PH0064.1_Hoxb9/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTAAGGC---
NGANTTTTATGGCTCN
 A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATCTTAAGGC--
-TTTTATGGCTN
 C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATCTTAAGGC----
AAGTTCAAGGTCAGC
 A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATCTTAAGGC-
NGCCTGAGGCN
 C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATCTTAAGGC
NTTTTATGAC
 C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G A G T C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ATCTTAAGGC--
--NTCAAGGTCA
 C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----ATCTTAAGGC
YSTTATCT------
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G A G T C
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T