Information for 1-CACAGCWGWGGCCMWG (Motif 1)

G T A C C G T A G T A C G T C A A C T G A G T C C G A T C T A G C G T A A C T G A T C G G T A C G T A C G T C A C G A T A T C G
Reverse Opposite:
A T G C G C A T A C G T C A T G A C T G A T G C A G T C C G A T A G T C C G T A C T A G A G T C A C G T A C T G C G A T A C T G
p-value:1e-11
log p-value:-2.574e+01
Information Content per bp:1.726
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif8.47%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.2 +/- 16.6bp
Average Position of motif in Background68.5 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CACAGCWGWGGCCMWG
NAHCAGCTGD-------
 A C G T G T A C C G T A G T A C G T C A A C T G A G T C C G A T C T A G C G T A A C T G A T C G G T A C G T A C G T C A C G A T A T C G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACAGCWGWGGCCMWG
AACAGCTG--------
 G T A C C G T A G T A C G T C A A C T G A G T C C G A T C T A G C G T A A C T G A T C G G T A C G T A C G T C A C G A T A T C G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACAGCWGWGGCCMWG
CACAGCAGGGGG----
 G T A C C G T A G T A C G T C A A C T G A G T C C G A T C T A G C G T A A C T G A T C G G T A C G T A C G T C A C G A T A T C G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCWGWGGCCMWG
DCHCAGCAGGRGGCC--
 A C G T G T A C C G T A G T A C G T C A A C T G A G T C C G A T C T A G C G T A A C T G A T C G G T A C G T A C G T C A C G A T A T C G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACAGCWGWGGCCMWG
BAACAGCTGT-------
 A C G T G T A C C G T A G T A C G T C A A C T G A G T C C G A T C T A G C G T A A C T G A T C G G T A C G T A C G T C A C G A T A T C G
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACAGCWGWGGCCMWG
AACAGCTGAT------
 G T A C C G T A G T A C G T C A A C T G A G T C C G A T C T A G C G T A A C T G A T C G G T A C G T A C G T C A C G A T A T C G
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACAGCWGWGGCCMWG
CACAGCGGGGGGTC--
 G T A C C G T A G T A C G T C A A C T G A G T C C G A T C T A G C G T A A C T G A T C G G T A C G T A C G T C A C G A T A T C G
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CACAGCWGWGGCCMWG
GACAGCTGCAG-----
 G T A C C G T A G T A C G T C A A C T G A G T C C G A T C T A G C G T A A C T G A T C G G T A C G T A C G T C A C G A T A T C G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACAGCWGWGGCCMWG
CACAGN----------
 G T A C C G T A G T A C G T C A A C T G A G T C C G A T C T A G C G T A A C T G A T C G G T A C G T A C G T C A C G A T A T C G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CACAGCWGWGGCCMWG
AACAGCTGCAG-----
 G T A C C G T A G T A C G T C A A C T G A G T C C G A T C T A G C G T A A C T G A T C G G T A C G T A C G T C A C G A T A T C G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T A C G T