Information for 8-AATTAAAGAC (Motif 8)

C G T A C G T A A C G T A G C T C G T A G T C A C G T A C T A G C G T A A G T C
Reverse Opposite:
A C T G A C G T G A T C C G A T A C G T A C G T C T G A T G C A G C A T A C G T
p-value:1e-11
log p-value:-2.740e+01
Information Content per bp:1.851
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif97.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets66.9 +/- 29.0bp
Average Position of motif in Background48.5 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AATTAAAGAC----
NNAATTAATGACCNNN
 A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A C G T A C T A G C G T A A G T C A C G T A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PH0023.1_Dlx4/Jaspar

Match Rank:2
Score:0.69
Offset:-7
Orientation:forward strand
Alignment:-------AATTAAAGAC
GCGCTATAATTACCGAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A C G T A C T A G C G T A A G T C
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

MNX1/MA0707.1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AATTAAAGAC
GGTAATTAAA---
 A C G T A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A C G T A C T A G C G T A A G T C
C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AATTAAAGAC
ACTAATTAAA---
 A C G T A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A C G T A C T A G C G T A A G T C
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATTAAAGAC
CTAATTAA----
 A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A C G T A C T A G C G T A A G T C
A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AATTAAAGAC--
GGTTAGAGACCT
 C G T A C G T A A C G T A G C T C G T A G T C A C G T A C T A G C G T A A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AATTAAAGAC
-ATTAAA---
 C G T A C G T A A C G T A G C T C G T A G T C A C G T A C T A G C G T A A G T C
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

LMX1B/MA0703.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATTAAAGAC
TTAATTAA----
 A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A C G T A C T A G C G T A A G T C
A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T A C G T A C G T A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------AATTAAAGAC-
CGAATTAATTAAAAACC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A C G T A C T A G C G T A A G T C A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

RAX/MA0718.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AATTAAAGAC
GCCAATTAAC---
 A C G T A C G T A C G T C G T A C G T A A C G T A G C T C G T A G T C A C G T A C T A G C G T A A G T C
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T A C G T A C G T