Information for 5-CTAGAAGKCAGTC (Motif 5)

A T G C A C G T C G T A A C T G C G T A C T G A A T C G A C G T A G T C C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G G T C A A G T C A C G T A C T G G T A C A T G C G A C T A C G T A G T C A C G T C G T A A T C G
p-value:1e-16
log p-value:-3.705e+01
Information Content per bp:1.849
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 23.5bp
Average Position of motif in Background63.8 +/- 42.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CTAGAAGKCAGTC-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T C G T A A C T G C G T A C T G A A T C G A C G T A G T C C G T A A C T G A C G T A G T C A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTAGAAGKCAGTC
--AGRGGTCA---
 A T G C A C G T C G T A A C T G C G T A C T G A A T C G A C G T A G T C C G T A A C T G A C G T A G T C
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTAGAAGKCAGTC
-CAAAGGTCAG--
 A T G C A C G T C G T A A C T G C G T A C T G A A T C G A C G T A G T C C G T A A C T G A C G T A G T C
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTAGAAGKCAGTC
NGNTCTAGAACCNGV--
 A C G T A C G T A C G T A C G T A T G C A C G T C G T A A C T G C G T A C T G A A T C G A C G T A G T C C G T A A C T G A C G T A G T C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGAAGKCAGTC
NNGATCTAGAACCTNNN-
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T C G T A A C T G C G T A C T G A A T C G A C G T A G T C C G T A A C T G A C G T A G T C
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTAGAAGKCAGTC
--TRAGGTCA---
 A T G C A C G T C G T A A C T G C G T A C T G A A T C G A C G T A G T C C G T A A C T G A C G T A G T C
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTAGAAGKCAGTC--
--AGGTGNCAGACAG
 A T G C A C G T C G T A A C T G C G T A C T G A A T C G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

BCL6B/MA0731.1/Jaspar

Match Rank:8
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------CTAGAAGKCAGTC
TGAATTCCTAGAAAGCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T C G T A A C T G C G T A C T G A A T C G A C G T A G T C C G T A A C T G A C G T A G T C
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTAGAAGKCAGTC
TTTCCTAGAAAGCA---
 A C G T A C G T A C G T A C G T A T G C A C G T C G T A A C T G C G T A C T G A A T C G A C G T A G T C C G T A A C T G A C G T A G T C
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTAGAAGKCAGTC
--AAAAGTCAA--
 A T G C A C G T C G T A A C T G C G T A C T G A A T C G A C G T A G T C C G T A A C T G A C G T A G T C
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T