Information for 6-GGGGGAGCGC (Motif 4)

A C T G T C A G A C T G T C A G A C T G G C T A T C A G A G T C C T A G A T G C
Reverse Opposite:
A T C G G A T C A C T G A G T C C G A T A G T C A G T C T G A C A G T C T G A C
p-value:1e-20
log p-value:-4.729e+01
Information Content per bp:1.727
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.00%
Number of Background Sequences with motif575.5
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets42.9 +/- 21.7bp
Average Position of motif in Background48.6 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GGGGGAGCGC
--CGGAGC--
 A C T G T C A G A C T G T C A G A C T G G C T A T C A G A G T C C T A G A T G C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GGGGGAGCGC--
--GGGAGGACNG
 A C T G T C A G A C T G T C A G A C T G G C T A T C A G A G T C C T A G A T G C A C G T A C G T
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGGGGAGCGC----
TTGGGGGCGCCCCTAG
 A C G T A C G T A C T G T C A G A C T G T C A G A C T G G C T A T C A G A G T C C T A G A T G C A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGGGGAGCGC
RGKGGGCGGAGC--
 A C G T A C G T A C G T A C G T A C T G T C A G A C T G T C A G A C T G G C T A T C A G A G T C C T A G A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGGGAGCGC---
ATAAGGGCGCGCGAT
 A C G T A C G T A C T G T C A G A C T G T C A G A C T G G C T A T C A G A G T C C T A G A T G C A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGAGCGC------
NNNNTGAGCACTGTNNG
 A C G T A C T G T C A G A C T G T C A G A C T G G C T A T C A G A G T C C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGGGAGCGC---
ATAAAGGCGCGCGAT
 A C G T A C G T A C T G T C A G A C T G T C A G A C T G G C T A T C A G A G T C C T A G A T G C A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGGGAGCGC
GGGCGGGACC--
 A C G T A C G T A C T G T C A G A C T G T C A G A C T G G C T A T C A G A G T C C T A G A T G C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGGGAGCGC
TGGGGA----
 A C T G T C A G A C T G T C A G A C T G G C T A T C A G A G T C C T A G A T G C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGGGAGCGC-
TGGGGAAGGGCM
 A C G T A C T G T C A G A C T G T C A G A C T G G C T A T C A G A G T C C T A G A T G C A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A