Information for 9-VAGTTGCAGTCTT (Motif 14)

T C G A C G T A A C T G A C G T A C G T A C T G G T A C C G T A C T A G A C G T A G T C A C G T A C G T
Reverse Opposite:
G T C A C G T A T A C G C G T A A G T C A C G T A C T G G T A C C G T A C G T A A G T C C G A T A C G T
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.843
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.7 +/- 24.4bp
Average Position of motif in Background50.3 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX4/MA0867.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---VAGTTGCAGTCTT
GAACAATTGCAGTGTT
 A C G T A C G T A C G T T C G A C G T A A C T G A C G T A C G T A C T G G T A C C G T A C T A G A C G T A G T C A C G T A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:VAGTTGCAGTCTT-----
NAGTTTCABTHTGACTNW
 T C G A C G T A A C T G A C G T A C G T A C T G G T A C C G T A C T A G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:VAGTTGCAGTCTT
-AGTTTCAGTTTC
 T C G A C G T A A C T G A C G T A C G T A C T G G T A C C G T A C T A G A C G T A G T C A C G T A C G T
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

Sox11/MA0869.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--VAGTTGCAGTCTT
AACAATTTCAGTGTT
 A C G T A C G T T C G A C G T A A C T G A C G T A C G T A C T G G T A C C G T A C T A G A C G T A G T C A C G T A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:VAGTTGCAGTCTT
-AGTTTCAKTTTC
 T C G A C G T A A C T G A C G T A C G T A C T G G T A C C G T A C T A G A C G T A G T C A C G T A C G T
A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:VAGTTGCAGTCTT
-ACTTTCACTTTC
 T C G A C G T A A C T G A C G T A C G T A C T G G T A C C G T A C T A G A C G T A G T C A C G T A C G T
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:VAGTTGCAGTCTT
TGGTTTCAGT---
 T C G A C G T A A C T G A C G T A C G T A C T G G T A C C G T A C T A G A C G T A G T C A C G T A C G T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:VAGTTGCAGTCTT--
-AGTTTCGGTTTCGN
 T C G A C G T A A C T G A C G T A C G T A C T G G T A C C G T A C T A G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:VAGTTGCAGTCTT
-RSTTTCRSTTTC
 T C G A C G T A A C T G A C G T A C G T A C T G G T A C C G T A C T A G A C G T A G T C A C G T A C G T
A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:VAGTTGCAGTCTT----
--CTTTCANTATGACTV
 T C G A C G T A A C T G A C G T A C G T A C T G G T A C C G T A C T A G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C