Information for 11-CATGTGTCTC (Motif 13)

A T G C C G T A A C G T C T A G A C G T T C A G A G C T G T A C C G A T G A T C
Reverse Opposite:
C T A G C G T A A C T G C T G A A G T C G T C A A G T C G T C A A C G T T A C G
p-value:1e-10
log p-value:-2.358e+01
Information Content per bp:1.828
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif123.3
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets44.6 +/- 19.8bp
Average Position of motif in Background54.0 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CATGTGTCTC
GTCATGTGACC-
 A C G T A C G T A T G C C G T A A C G T C T A G A C G T T C A G A G C T G T A C C G A T G A T C
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

Myc/MA0147.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CATGTGTCTC
CCATGTGCTT-
 A C G T A T G C C G T A A C G T C T A G A C G T T C A G A G C T G T A C C G A T G A T C
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CATGTGTCTC--
GCACGTGTCNNNN
 A C G T A T G C C G T A A C G T C T A G A C G T T C A G A G C T G T A C C G A T G A T C A C G T A C G T
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CATGTGTCTC
ACCATATGTT--
 A C G T A C G T A T G C C G T A A C G T C T A G A C G T T C A G A G C T G T A C C G A T G A T C
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATGTGTCTC
AACATATGTC--
 A C G T A C G T A T G C C G T A A C G T C T A G A C G T T C A G A G C T G T A C C G A T G A T C
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CATGTGTCTC
RTCATGTGAC--
 A C G T A C G T A T G C C G T A A C G T C T A G A C G T T C A G A G C T G T A C C G A T G A T C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CATGTGTCTC
GGCACGTGNC--
 A C G T A C G T A T G C C G T A A C G T C T A G A C G T T C A G A G C T G T A C C G A T G A T C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CATGTGTCTC
CCATATGT---
 A C G T A T G C C G T A A C G T C T A G A C G T T C A G A G C T G T A C C G A T G A T C
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CATGTGTCTC
CACGTGDC--
 A T G C C G T A A C G T C T A G A C G T T C A G A G C T G T A C C G A T G A T C
G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CATGTGTCTC
GGCACGTGTC--
 A C G T A C G T A T G C C G T A A C G T C T A G A C G T T C A G A G C T G T A C C G A T G A T C
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T