p-value: | 1e-13 |
log p-value: | -3.044e+01 |
Information Content per bp: | 1.844 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.67% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 43.3 +/- 19.2bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 1 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTSYMTAGAGGKMMCT GGGTTACTANAGGTCA-- |
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SMAD3/MA0795.1/Jaspar
Match Rank: | 2 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTSYMTAGAGGKMMCT -TGTCTAGACG----- |
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CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 3 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTSYMTAGAGGKMMCT-- TGGCCACCAGGTGGCACTNT |
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PB0128.1_Gcm1_2/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTSYMTAGAGGKMMCT TGCGCATAGGGGAGGAG |
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Rarg(var.2)/MA0860.1/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTSYMTAGAGGKMMCT AAGGTCACGAAAGGTCA-- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 6 |
Score: | 0.51 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GTSYMTAGAGGKMMCT ------AGRGGTCA-- |
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CTCF/MA0139.1/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTSYMTAGAGGKMMCT- TGGCCACCAGGGGGCGCTA |
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Bcl6/MA0463.1/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTSYMTAGAGGKMMCT TTTCCTAGAAAGCA-- |
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BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTSYMTAGAGGKMMCT---- GCCASCAGGGGGCGCYVNNG |
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THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer
Match Rank: | 10 |
Score: | 0.49 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTSYMTAGAGGKMMCT GGTCANYTGAGGWCA-- |
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