Information for 6-AGATCAATAA (Motif 5)

C G T A T C A G C T G A A C G T T A G C C G T A G C T A C G A T C T G A C T G A
Reverse Opposite:
G A C T G A C T G C T A C G A T C G A T A T C G C G T A G A C T A G T C G C A T
p-value:1e-13
log p-value:-3.135e+01
Information Content per bp:1.693
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.56%
Number of Background Sequences with motif905.9
Percentage of Background Sequences with motif1.94%
Average Position of motif in Targets44.3 +/- 26.8bp
Average Position of motif in Background49.6 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:AGATCAATAA
DGATCRATAN
 C G T A T C A G C T G A A C G T T A G C C G T A G C T A C G A T C T G A C T G A
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AGATCAATAA
HNRAATCAAT--
 A C G T A C G T C G T A T C A G C T G A A C G T T A G C C G T A G C T A C G A T C T G A C T G A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AGATCAATAA----
GAAGATCAATCACTTA
 A C G T A C G T C G T A T C A G C T G A A C G T T A G C C G T A G C T A C G A T C T G A C T G A A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AGATCAATAA----
GAAGATCAATCACTAA
 A C G T A C G T C G T A T C A G C T G A A C G T T A G C C G T A G C T A C G A T C T G A C T G A A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AGATCAATAA-
AAAAAATCAATAAT
 A C G T A C G T A C G T C G T A T C A G C T G A A C G T T A G C C G T A G C T A C G A T C T G A C T G A A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

PB0197.1_Zfp105_2/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AGATCAATAA-----
ATGGTTCAATAATTTTG
 A C G T A C G T C G T A T C A G C T G A A C G T T A G C C G T A G C T A C G A T C T G A C T G A A C G T A C G T A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGATCAATAA-
AAAAAATCGATAAT
 A C G T A C G T A C G T C G T A T C A G C T G A A C G T T A G C C G T A G C T A C G A T C T G A C T G A A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGATCAATAA-
AAAAAATCGATAAT
 A C G T A C G T A C G T C G T A T C A G C T G A A C G T T A G C C G T A G C T A C G A T C T G A C T G A A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

CUX1/MA0754.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGATCAATAA
TAATCGATAA
 C G T A T C A G C T G A A C G T T A G C C G T A G C T A C G A T C T G A C T G A
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CUX2/MA0755.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGATCAATAA
TAATCGATAA
 C G T A T C A G C T G A A C G T T A G C C G T A G C T A C G A T C T G A C T G A
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A