Information for 10-TGACCATTCACTC (Motif 5)

A C G T C T A G C G T A A T G C A G T C C G T A A C G T A C G T G A T C C G T A A G T C A C G T G T A C
Reverse Opposite:
A C T G C G T A A C T G A C G T C T A G C G T A C G T A A C G T A C T G A T C G A C G T A G T C C G T A
p-value:1e-12
log p-value:-2.898e+01
Information Content per bp:1.892
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.0 +/- 25.3bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGACCATTCACTC
TGACCTTTNCNT-
 A C G T C T A G C G T A A T G C A G T C C G T A A C G T A C G T G A T C C G T A A G T C A C G T G T A C
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGACCATTCACTC-
TGACCTTTGACCCC
 A C G T C T A G C G T A A T G C A G T C C G T A A C G T A C G T G A T C C G T A A G T C A C G T G T A C A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCATTCACTC-
TGACCTTTGACCCC
 A C G T C T A G C G T A A T G C A G T C C G T A A C G T A C G T G A T C C G T A A G T C A C G T G T A C A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCATTCACTC-
TGACCTTTGACCCC
 A C G T C T A G C G T A A T G C A G T C C G T A A C G T A C G T G A T C C G T A A G T C A C G T G T A C A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCATTCACTC-
TGACCTTTGACCTN
 A C G T C T A G C G T A A T G C A G T C C G T A A C G T A C G T G A T C C G T A A G T C A C G T G T A C A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGACCATTCACTC
NNNNTGACCTTTNNNN-
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T G C A G T C C G T A A C G T A C G T G A T C C G T A A G T C A C G T G T A C
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGACCATTCACTC
ACTAGCCAATCA---
 A C G T A C G T A C G T C T A G C G T A A T G C A G T C C G T A A C G T A C G T G A T C C G T A A G T C A C G T G T A C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGACCATTCACTC
NNNGTGACCTTTGNNN-
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T G C A G T C C G T A A C G T A C G T G A T C C G T A A G T C A C G T G T A C
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGACCATTCACTC
-GGCCATTAAC--
 A C G T C T A G C G T A A T G C A G T C C G T A A C G T A C G T G A T C C G T A A G T C A C G T G T A C
A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGACCATTCACTC-
TGACCTTTGACCTC
 A C G T C T A G C G T A A T G C A G T C C G T A A C G T A C G T G A T C C G T A A G T C A C G T G T A C A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C