Information for 17-ACAAATATTT (Motif 21)

C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C T G A C G T
p-value:1e-7
log p-value:-1.629e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.2 +/- 25.9bp
Average Position of motif in Background36.6 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ACAAATATTT-----
-CTAATATTGCTAAA
 C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ACAAATATTT-----
-CTAATATTGCTAAA
 C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACAAATATTT
AAACAAACATTC
 A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0172.1_Sox1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ACAAATATTT
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACAAATATTT
---AATAATT
 C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------ACAAATATTT-
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ACAAATATTT
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------ACAAATATTT
NNCNNAACAATTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACAAATATTT
ATGAATATTC
 C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACAAATATTT
RNAACAATGG---
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T