Information for 6-TGGGTTACCAATT (Motif 2)

A C G T A C T G C T A G A C T G A C G T C G A T G T C A G T A C A G T C G T C A C G T A A C G T C G A T
Reverse Opposite:
C G T A C G T A C G A T A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C T G A C C G T A
p-value:1e-20
log p-value:-4.754e+01
Information Content per bp:1.781
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.6 +/- 23.2bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nobox/MA0125.1/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TGGGTTACCAATT-
------ACCAATTA
 A C G T A C T G C T A G A C T G A C G T C G A T G T C A G T A C A G T C G T C A C G T A A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A

VENTX/MA0724.1/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TGGGTTACCAATT--
------ACCGATTAG
 A C G T A C T G C T A G A C T G A C G T C G A T G T C A G T A C A G T C G T C A C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

PH0127.1_Nobox/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGGGTTACCAATT------
--GNTNNCTAATTAGNNCG
 A C G T A C T G C T A G A C T G A C G T C G A T G T C A G T A C A G T C G T C A C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G C T G A C G A T C G T A T G A C A G T C G A C T C T G A C G T A G C A T A G C T C T G A T C A G A G T C A T C G T A G C A T C G

MSX2/MA0708.1/Jaspar

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TGGGTTACCAATT--
-------CCAATTAA
 A C G T A C T G C T A G A C T G A C G T C G A T G T C A G T A C A G T C G T C A C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGGGTTACCAATT--
--GGTTAAACATTAA
 A C G T A C T G C T A G A C T G A C G T C G A T G T C A G T A C A G T C G T C A C G T A A C G T C G A T A C G T A C G T
A C G T A C G T C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

MSX1/MA0666.1/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TGGGTTACCAATT--
-------CCAATTAG
 A C G T A C T G C T A G A C T G A C G T C G A T G T C A G T A C A G T C G T C A C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

PH0107.1_Msx2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGGGTTACCAATT------
--GAAGACCAATTAGCGCT
 A C G T A C T G C T A G A C T G A C G T C G A T G T C A G T A C A G T C G T C A C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGGGTTACCAATT--
---GTTAATNATTAA
 A C G T A C T G C T A G A C T G A C G T C G A T G T C A G T A C A G T C G T C A C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

GBX1/MA0889.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TGGGTTACCAATT---
------ACTAATTAGC
 A C G T A C T G C T A G A C T G A C G T C G A T G T C A G T A C A G T C G T C A C G T A A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C

HNF1A/MA0046.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGGGTTACCAATT----
--NGTTAATNATTAACN
 A C G T A C T G C T A G A C T G A C G T C G A T G T C A G T A C A G T C G T C A C G T A A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T