Information for 14-CATTGTTATACCA (Motif 13)

A G T C T C G A A G C T A C G T A T C G A C G T G C A T G C T A C A G T T G C A G T A C A G T C C G T A
Reverse Opposite:
C G A T A C T G C A T G A C G T G T C A C G A T C G T A T G C A A T G C C G T A T C G A A C G T C T A G
p-value:1e-11
log p-value:-2.595e+01
Information Content per bp:1.695
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets55.3 +/- 25.0bp
Average Position of motif in Background39.9 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0067.1_Sox18_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CATTGTTATACCA
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T A G T C T C G A A G C T A C G T A T C G A C G T G C A T G C T A C A G T T G C A G T A C A G T C C G T A
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATTGTTATACCA
CCATTGTTYB----
 A C G T A G T C T C G A A G C T A C G T A T C G A C G T G C A T G C T A C A G T T G C A G T A C A G T C C G T A
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CATTGTTATACCA
-ATTGTTA-----
 A G T C T C G A A G C T A C G T A T C G A C G T G C A T G C T A C A G T T G C A G T A C A G T C C G T A
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATTGTTATACCA
CCATTGTTC-----
 A C G T A G T C T C G A A G C T A C G T A T C G A C G T G C A T G C T A C A G T T G C A G T A C A G T C C G T A
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CATTGTTATACCA
ANNTCCATTGTTCNNN--
 A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G C T A C G T A T C G A C G T G C A T G C T A C A G T T G C A G T A C A G T C C G T A
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CATTGTTATACCA
CCATTGTTTT----
 A C G T A G T C T C G A A G C T A C G T A T C G A C G T G C A T G C T A C A G T T G C A G T A C A G T C C G T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATTGTTATACCA
-ATTGTTTAN---
 A G T C T C G A A G C T A C G T A T C G A C G T G C A T G C T A C A G T T G C A G T A C A G T C C G T A
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATTGTTATACCA
-ATTGTT------
 A G T C T C G A A G C T A C G T A T C G A C G T G C A T G C T A C A G T T G C A G T A C A G T C C G T A
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATTGTTATACCA
NCCATTGTTC-----
 A C G T A C G T A G T C T C G A A G C T A C G T A T C G A C G T G C A T G C T A C A G T T G C A G T A C A G T C C G T A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CATTGTTATACCA
TAATTGTTCTAAAC
 A C G T A G T C T C G A A G C T A C G T A T C G A C G T G C A T G C T A C A G T T G C A G T A C A G T C C G T A
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C