Information for 6-GAACTAGTAGTTT (Motif 5)

A T C G C G T A C G T A A T G C A G C T C G T A A T C G A G C T C G T A A C T G A G C T A C G T A C G T
Reverse Opposite:
C G T A G T C A C T G A G T A C C G A T C T G A A T G C G C A T C T G A A T C G A C G T A C G T A T G C
p-value:1e-15
log p-value:-3.676e+01
Information Content per bp:1.815
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.5 +/- 21.3bp
Average Position of motif in Background27.2 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAACTAGTAGTTT
GGGAATTGTAGT--
 A C G T A T C G C G T A C G T A A T G C A G C T C G T A A T C G A G C T C G T A A C T G A G C T A C G T A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAACTAGTAGTTT
VAGRACAKNCTGTBC
 A C G T A C G T A T C G C G T A C G T A A T G C A G C T C G T A A T C G A G C T C G T A A C T G A G C T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

PB0115.1_Ehf_2/Jaspar

Match Rank:3
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------GAACTAGTAGTTT
AAGATCGGAANTNNNA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A C G T A A T G C A G C T C G T A A T C G A G C T C G T A A C T G A G C T A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:4
Score:0.52
Offset:-8
Orientation:reverse strand
Alignment:--------GAACTAGTAGTTT
GCMTBCTGGGAGTTGTAGTY-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A C G T A A T G C A G C T C G T A A T C G A G C T C G T A A C T G A G C T A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:5
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GAACTAGTAGTTT
AGCTGTTAACTAGCCGT--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A C G T A A T G C A G C T C G T A A T C G A G C T C G T A A C T G A G C T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------GAACTAGTAGTTT
TTAAGAGGAAGTTA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A C G T A A T G C A G C T C G T A A T C G A G C T C G T A A C T G A G C T A C G T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAACTAGTAGTTT
GTTAACTAGN-----
 A C G T A C G T A T C G C G T A C G T A A T G C A G C T C G T A A T C G A G C T C G T A A C T G A G C T A C G T A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GAACTAGTAGTTT
GANGTTAACTAGTTTNN-
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A C G T A A T G C A G C T C G T A A T C G A G C T C G T A A C T G A G C T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GAACTAGTAGTTT
AAGAACATWHTGTTC
 A C G T A C G T A T C G C G T A C G T A A T G C A G C T C G T A A T C G A G C T C G T A A C T G A G C T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GAACTAGTAGTTT
---NTAATKGTTT
 A T C G C G T A C G T A A T G C A G C T C G T A A T C G A G C T C G T A A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T