Information for 5-TGGCTAAGTAAGCACA (Motif 4)

A G C T A T C G A C T G A G T C C G A T C T G A C T G A A C T G G A C T C G T A C G T A A C T G A G T C C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A G T C A C G T A C G T C T G A A G T C A G C T A G C T C G T A C T A G G T A C A T G C C T G A
p-value:1e-16
log p-value:-3.888e+01
Information Content per bp:1.815
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets32.6 +/- 16.9bp
Average Position of motif in Background73.6 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0041.1_Mafb_1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGGCTAAGTAAGCACA---
--NCTANGTCAGCAAATTT
 A G C T A T C G A C T G A G T C C G A T C T G A C T G A A C T G G A C T C G T A C G T A A C T G A G T C C G T A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGGCTAAGTAAGCACA-
--CAAAAGTAAACAAAG
 A G C T A T C G A C T G A G T C C G A T C T G A C T G A A C T G G A C T C G T A C G T A A C T G A G T C C G T A G T A C C G T A A C G T
A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TGGCTAAGTAAGCACA
----AAAGTAAACA--
 A G C T A T C G A C T G A G T C C G A T C T G A C T G A A C T G G A C T C G T A C G T A A C T G A G T C C G T A G T A C C G T A
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TGGCTAAGTAAGCACA
----AAAGTAAACA--
 A G C T A T C G A C T G A G T C C G A T C T G A C T G A A C T G G A C T C G T A C G T A A C T G A G T C C G T A G T A C C G T A
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGGCTAAGTAAGCACA
--NCTAAGTAAACA--
 A G C T A T C G A C T G A G T C C G A T C T G A C T G A A C T G G A C T C G T A C G T A A C T G A G T C C G T A G T A C C G T A
A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TGGCTAAGTAAGCACA
-----AAGTAAACAAA
 A G C T A T C G A C T G A G T C C G A T C T G A C T G A A C T G G A C T C G T A C G T A A C T G A G T C C G T A G T A C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGGCTAAGTAAGCACA--
---CAAAGTAAACANNNN
 A G C T A T C G A C T G A G T C C G A T C T G A C T G A A C T G G A C T C G T A C G T A A C T G A G T C C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGGCTAAGTAAGCACA
----TAAGTAAACAAA
 A G C T A T C G A C T G A G T C C G A T C T G A C T G A A C T G G A C T C G T A C G T A A C T G A G T C C G T A G T A C C G T A
A C G T A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGGCTAAGTAAGCACA
----WAAGTAAAYA--
 A G C T A T C G A C T G A G T C C G A T C T G A C T G A A C T G G A C T C G T A C G T A A C T G A G T C C G T A G T A C C G T A
A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGCTAAGTAAGCACA
NNNVCTGWGYAAACASN
 A C G T A G C T A T C G A C T G A G T C C G A T C T G A C T G A A C T G G A C T C G T A C G T A A C T G A G T C C G T A G T A C C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A