Information for 7-GTTRGCTTTTACCTAT (Motif 19)

A C T G C A G T A G C T C T G A T C A G A G T C A G C T A C G T A C G T A C G T G C T A A G T C G T A C A G C T G T C A A G C T
Reverse Opposite:
C T G A C A G T C T G A A C T G T A C G C G A T C G T A C G T A G T C A T C G A A C T G A G T C G A C T C T G A G T C A G T A C
p-value:1e-10
log p-value:-2.447e+01
Information Content per bp:1.705
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.2 +/- 22.9bp
Average Position of motif in Background51.2 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTTRGCTTTTACCTAT
--TGACCTTTNCNT--
 A C T G C A G T A G C T C T G A T C A G A G T C A G C T A C G T A C G T A C G T G C T A A G T C G T A C A G C T G T C A A G C T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTTRGCTTTTACCTAT
--TGACCTTGACCT--
 A C T G C A G T A G C T C T G A T C A G A G T C A G C T A C G T A C G T A C G T G C T A A G T C G T A C A G C T G T C A A G C T
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTTRGCTTTTACCTAT
-TTGACTTTT------
 A C T G C A G T A G C T C T G A T C A G A G T C A G C T A C G T A C G T A C G T G C T A A G T C G T A C A G C T G T C A A G C T
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTTRGCTTTTACCTAT
---ANCGTTTANN---
 A C T G C A G T A G C T C T G A T C A G A G T C A G C T A C G T A C G T A C G T G C T A A G T C G T A C A G C T G T C A A G C T
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTTRGCTTTTACCTAT
--TGACCTTGACCT--
 A C T G C A G T A G C T C T G A T C A G A G T C A G C T A C G T A C G T A C G T G C T A A G T C G T A C A G C T G T C A A G C T
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTTRGCTTTTACCTAT--
----NNTTTTTCTTATNT
 A C T G C A G T A G C T C T G A T C A G A G T C A G C T A C G T A C G T A C G T G C T A A G T C G T A C A G C T G T C A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GTTRGCTTTTACCTAT
----CCTTTGATCTTT
 A C T G C A G T A G C T C T G A T C A G A G T C A G C T A C G T A C G T A C G T G C T A A G T C G T A C A G C T G T C A A G C T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTTRGCTTTTACCTAT
-TGACCTTTGCCCCA-
 A C T G C A G T A G C T C T G A T C A G A G T C A G C T A C G T A C G T A C G T G C T A A G T C G T A C A G C T G T C A A G C T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTTRGCTTTTACCTAT
-AACCCTTTGATCTTT
 A C T G C A G T A G C T C T G A T C A G A G T C A G C T A C G T A C G T A C G T G C T A A G T C G T A C A G C T G T C A A G C T
A C G T C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

PB0021.1_Gata3_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTTRGCTTTTACCTAT-----
NNTNANTTCTTATCTCTANANN
 A C G T A C T G C A G T A G C T C T G A T C A G A G T C A G C T A C G T A C G T A C G T G C T A A G T C G T A C A G C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A