Information for 14-CAGGCTAATAAAC (Motif 16)

A G T C C G T A C T A G T C A G A G T C C G A T C T G A C G T A A C G T G T C A C G T A C G T A A G T C
Reverse Opposite:
C T A G A C G T A C G T A C G T C G T A A C G T A G C T C G T A A C T G A G T C A G T C A C G T A C T G
p-value:1e-11
log p-value:-2.716e+01
Information Content per bp:1.903
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.3 +/- 16.0bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CAGGCTAATAAAC-
----CCAATAAAAA
 A G T C C G T A C T A G T C A G A G T C C G A T C T G A C G T A A C G T G T C A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CAGGCTAATAAAC
---NCYAATAAAA
 A G T C C G T A C T A G T C A G A G T C C G A T C T G A C G T A A C G T G T C A C G T A C G T A A G T C
A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:3
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CAGGCTAATAAAC-
----CCAATAAAAA
 A G T C C G T A C T A G T C A G A G T C C G A T C T G A C G T A A C G T G T C A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CAGGCTAATAAAC
---CCYMATAAAA
 A G T C C G T A C T A G T C A G A G T C C G A T C T G A C G T A A C G T G T C A C G T A C G T A A G T C
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAGGCTAATAAAC----
-AACCCAATAAAATTCG
 A G T C C G T A C T A G T C A G A G T C C G A T C T G A C G T A A C G T G T C A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CAGGCTAATAAAC-
----CCAATAAAAC
 A G T C C G T A C T A G T C A G A G T C C G A T C T G A C G T A A C G T G T C A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

LHX2/MA0700.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CAGGCTAATAAAC
---ACTAATTAAC
 A G T C C G T A C T A G T C A G A G T C C G A T C T G A C G T A A C G T G T C A C G T A C G T A A G T C
A C G T A C G T A C G T T C G A A G T C G A C T G T C A C T G A A C G T A C G T C T G A C T G A A T G C

mix-a/MA0621.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CAGGCTAATAAAC-
---NCTAATTAANN
 A G T C C G T A C T A G T C A G A G T C C G A T C T G A C G T A A C G T G T C A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

LHX6/MA0658.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CAGGCTAATAAAC
---ACTAATTAGC
 A G T C C G T A C T A G T C A G A G T C C G A T C T G A C G T A A C G T G T C A C G T A C G T A A G T C
A C G T A C G T A C G T T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C

LMX1B/MA0703.1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAGGCTAATAAAC
----TTAATTAA-
 A G T C C G T A C T A G T C A G A G T C C G A T C T G A C G T A A C G T G T C A C G T A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T