Information for 12-RSAAATATTTSYT (Motif 12)

C T G A A T C G G T C A G C T A C G T A A G C T C G T A A C G T C A G T C A G T T A G C G A C T G C A T
Reverse Opposite:
C G T A C T G A A T C G G T C A G C T A C G T A C G A T C T G A A C G T C A G T C A G T T A G C G A C T
p-value:1e-12
log p-value:-2.769e+01
Information Content per bp:1.688
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.17%
Number of Background Sequences with motif61.4
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets52.1 +/- 22.8bp
Average Position of motif in Background50.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---RSAAATATTTSYT
NNTNNCAATATTAG--
 A C G T A C G T A C G T C T G A A T C G G T C A G C T A C G T A A G C T C G T A A C G T C A G T C A G T T A G C G A C T G C A T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---RSAAATATTTSYT
NNTNNCAATATTAG--
 A C G T A C G T A C G T C T G A A T C G G T C A G C T A C G T A A G C T C G T A A C G T C A G T C A G T T A G C G A C T G C A T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:RSAAATATTTSYT
---AATAATT---
 C T G A A T C G G T C A G C T A C G T A A G C T C G T A A C G T C A G T C A G T T A G C G A C T G C A T
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:RSAAATATTTSYT-
--GAATGTTTGTTT
 C T G A A T C G G T C A G C T A C G T A A G C T C G T A A C G T C A G T C A G T T A G C G A C T G C A T A C G T
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:RSAAATATTTSYT--
----ATATTTACATA
 C T G A A T C G G T C A G C T A C G T A A G C T C G T A A C G T C A G T C A G T T A G C G A C T G C A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:RSAAATATTTSYT--
-----TRTTTACTTW
 C T G A A T C G G T C A G C T A C G T A A G C T C G T A A C G T C A G T C A G T T A G C G A C T G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:RSAAATATTTSYT--
----ATATTTACATA
 C T G A A T C G G T C A G C T A C G T A A G C T C G T A A C G T C A G T C A G T T A G C G A C T G C A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RSAAATATTTSYT
ATGAATATTC---
 C T G A A T C G G T C A G C T A C G T A A G C T C G T A A C G T C A G T C A G T T A G C G A C T G C A T
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--RSAAATATTTSYT--
NNNCTGATATCTCNNNN
 A C G T A C G T C T G A A T C G G T C A G C T A C G T A A G C T C G T A A C G T C A G T C A G T T A G C G A C T G C A T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:RSAAATATTTSYT---
------ATTTCCTGTN
 C T G A A T C G G T C A G C T A C G T A A G C T C G T A A C G T C A G T C A G T T A G C G A C T G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G