Information for 8-GGCCCAGATA (Motif 10)

A C T G A T C G A G T C G A T C G T A C C G T A A C T G G C T A G C A T C T G A
Reverse Opposite:
A G C T C G T A C A G T A G T C A C G T A C T G C T A G A C T G A T G C G T A C
p-value:1e-12
log p-value:-2.899e+01
Information Content per bp:1.844
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif17.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets47.5 +/- 28.0bp
Average Position of motif in Background53.6 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGCCCAGATA
TGCCCAGNHW
 A C T G A T C G A G T C G A T C G T A C C G T A A C T G G C T A G C A T C T G A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGCCCAGATA
AGGCCTAG---
 A C G T A C T G A T C G A G T C G A T C G T A C C G T A A C T G G C T A G C A T C T G A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGCCCAGATA---
-----AGATAASR
 A C T G A T C G A G T C G A T C G T A C C G T A A C T G G C T A G C A T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGCCCAGATA-
---CCAGACAG
 A C T G A T C G A G T C G A T C G T A C C G T A A C T G G C T A G C A T C T G A A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCCCAGATA-----
CAAATCCAGACATCACA
 A C G T A C G T A C T G A T C G A G T C G A T C G T A C C G T A A C T G G C T A G C A T C T G A A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCCCAGATA--
--TCCAGATGTT
 A C T G A T C G A G T C G A T C G T A C C G T A A C T G G C T A G C A T C T G A A C G T A C G T
A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGCCCAGATA---
-----AGATAAGA
 A C T G A T C G A G T C G A T C G T A C C G T A A C T G G C T A G C A T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGCCCAGATA----
----CAGATAAGGN
 A C T G A T C G A G T C G A T C G T A C C G T A A C T G G C T A G C A T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGCCCAGATA---
---CCAGACRSVB
 A C T G A T C G A G T C G A T C G T A C C G T A A C T G G C T A G C A T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGCCCAGATA----
----NAGATAAGNN
 A C T G A T C G A G T C G A T C G T A C C G T A A C T G G C T A G C A T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A