Information for 10-TWTTTATKKASTG (Motif 7)

A C G T G C T A A C G T A C G T A C G T G T C A A C G T A C G T A C T G C G T A A T G C C G A T A T C G
Reverse Opposite:
A T G C C G T A A T C G A C G T G T A C G T C A C G T A A C G T C G T A C G T A C G T A C G A T C G T A
p-value:1e-12
log p-value:-2.894e+01
Information Content per bp:1.858
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.7 +/- 25.3bp
Average Position of motif in Background42.9 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TWTTTATKKASTG
TGTTTATTT----
 A C G T G C T A A C G T A C G T A C G T G T C A A C G T A C G T A C T G C G T A A T G C C G A T A T C G
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TWTTTATKKASTG
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T G C T A A C G T A C G T A C G T G T C A A C G T A C G T A C T G C G T A A T G C C G A T A T C G
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TWTTTATKKASTG
TTTTTATTGG---
 A C G T G C T A A C G T A C G T A C G T G T C A A C G T A C G T A C T G C G T A A T G C C G A T A T C G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TWTTTATKKASTG
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T G C T A A C G T A C G T A C G T G T C A A C G T A C G T A C T G C G T A A T G C C G A T A T C G
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TWTTTATKKASTG
NTTTTATTGG---
 A C G T G C T A A C G T A C G T A C G T G T C A A C G T A C G T A C T G C G T A A T G C C G A T A T C G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TWTTTATKKASTG
-TTTTATTGC---
 A C G T G C T A A C G T A C G T A C G T G T C A A C G T A C G T A C T G C G T A A T G C C G A T A T C G
A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TWTTTATKKASTG
NTTTTATTGG---
 A C G T G C T A A C G T A C G T A C G T G T C A A C G T A C G T A C T G C G T A A T G C C G A T A T C G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TWTTTATKKASTG
NTNAATTTTATTGNATT
 A C G T A C G T A C G T A C G T A C G T G C T A A C G T A C G T A C G T G T C A A C G T A C G T A C T G C G T A A T G C C G A T A T C G
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TWTTTATKKASTG
NTTTTATTACN--
 A C G T G C T A A C G T A C G T A C G T G T C A A C G T A C G T A C T G C G T A A T G C C G A T A T C G
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TWTTTATKKASTG
TGTTTAC------
 A C G T G C T A A C G T A C G T A C G T G T C A A C G T A C G T A C T G C G T A A T G C C G A T A T C G
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T