Information for 9-TGTCAACAAAGCA (Motif 6)

A C G T C T A G C G A T A T G C G T C A C G T A A G T C C G T A G C T A C G T A A T C G T A G C G T C A
Reverse Opposite:
A C G T A C T G A T G C A C G T C A G T A C G T A C T G C G A T A C G T A T C G C G T A A G T C C G T A
p-value:1e-12
log p-value:-2.894e+01
Information Content per bp:1.818
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.9 +/- 24.4bp
Average Position of motif in Background54.7 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGTCAACAAAGCA---
AGAAGAACAAAGGACTA
 A C G T A C G T C T A G C G A T A T G C G T C A C G T A A G T C C G T A G C T A C G T A A T C G T A G C G T C A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGTCAACAAAGCA---
ATAAGAACAAAGGACTA
 A C G T A C G T C T A G C G A T A T G C G T C A C G T A A G T C C G T A G C T A C G T A A T C G T A G C G T C A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGTCAACAAAGCA
--GGAACAAAGR-
 A C G T C T A G C G A T A T G C G T C A C G T A A G T C C G T A G C T A C G T A A T C G T A G C G T C A
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTCAACAAAGCA---
TATAGATCAAAGGAAAA
 A C G T A C G T C T A G C G A T A T G C G T C A C G T A A G T C C G T A G C T A C G T A A T C G T A G C G T C A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTCAACAAAGCA---
TATAGATCAAAGGAAAA
 A C G T A C G T C T A G C G A T A T G C G T C A C G T A A G T C C G T A G C T A C G T A A T C G T A G C G T C A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Foxk1/MA0852.1/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TGTCAACAAAGCA
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A C G T C T A G C G A T A T G C G T C A C G T A A G T C C G T A G C T A C G T A A T C G T A G C G T C A
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TGTCAACAAAGCA
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A C G T C T A G C G A T A T G C G T C A C G T A A G T C C G T A G C T A C G T A A T C G T A G C G T C A
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTCAACAAAGCA---
NNNAGATCAAAGGANNN
 A C G T A C G T C T A G C G A T A T G C G T C A C G T A A G T C C G T A G C T A C G T A A T C G T A G C G T C A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGTCAACAAAGCA-
AAAGTAAACAAAAATT
 A C G T A C G T A C G T C T A G C G A T A T G C G T C A C G T A A G T C C G T A G C T A C G T A A T C G T A G C G T C A A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGTCAACAAAGCA
--VRRACAAWGG-
 A C G T C T A G C G A T A T G C G T C A C G T A A G T C C G T A G C T A C G T A A T C G T A G C G T C A
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T