Information for 6-ATTTGTTCAG (Motif 5)

C G T A C A G T C G A T A C G T C T A G G A C T A C G T A G T C C G T A A T C G
Reverse Opposite:
T A G C C G A T T C A G C G T A C T G A G A T C C G T A G C T A G C T A A C G T
p-value:1e-12
log p-value:-2.938e+01
Information Content per bp:1.831
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif33.8
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets54.9 +/- 20.0bp
Average Position of motif in Background49.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0011.1_HMG_class/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATTTGTTCAG
-ATTGTT---
 C G T A C A G T C G A T A C G T C T A G G A C T A C G T A G T C C G T A A T C G
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATTTGTTCAG---
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T C G T A C A G T C G A T A C G T C T A G G A C T A C G T A G T C C G T A A T C G A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGTTCAG---
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T C G T A C A G T C G A T A C G T C T A G G A C T A C G T A G T C C G T A A T C G A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

PB0065.1_Sox15_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ATTTGTTCAG--
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C G T A C G T C G T A C A G T C G A T A C G T C T A G G A C T A C G T A G T C C G T A A T C G A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATTTGTTCAG--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T C G T A C A G T C G A T A C G T C T A G G A C T A C G T A G T C C G T A A T C G A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATTTGTTCAG--
AAAATTGTTATGAA
 A C G T A C G T C G T A C A G T C G A T A C G T C T A G G A C T A C G T A G T C C G T A A T C G A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGTTCAG-----
NNNTTTGTTTACNTTNN
 A C G T A C G T C G T A C A G T C G A T A C G T C T A G G A C T A C G T A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGTTCAG-----
NNNTTTGTTTACNTTNN
 A C G T A C G T C G T A C A G T C G A T A C G T C T A G G A C T A C G T A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATTTGTTCAG--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T C G T A C A G T C G A T A C G T C T A G G A C T A C G T A G T C C G T A A T C G A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATTTGTTCAG
YCTTTGTTCC-
 A C G T C G T A C A G T C G A T A C G T C T A G G A C T A C G T A G T C C G T A A T C G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T