Information for 22-TGTATCACYAGCC (Motif 25)

A G C T A C T G A G C T C T G A A C G T G T A C C G T A A G T C A G C T C T G A A C T G G T A C A G T C
Reverse Opposite:
C T A G C A T G A G T C A G C T C T G A A C T G A C G T A C T G G T C A A G C T C T G A G T A C T C G A
p-value:1e-8
log p-value:-1.956e+01
Information Content per bp:1.771
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets41.2 +/- 27.3bp
Average Position of motif in Background45.5 +/- 42.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTATCACYAGCC
AATGTATCAAT----
 A C G T A C G T A G C T A C T G A G C T C T G A A C G T G T A C C G T A A G T C A G C T C T G A A C T G G T A C A G T C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGTATCACYAGCC
AATGGGGTATCACGTTT-
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G C T C T G A A C G T G T A C C G T A A G T C A G C T C T G A A C T G G T A C A G T C
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGTATCACYAGCC
GATAGGGTATCACTAAT-
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G C T C T G A A C G T G T A C C G T A A G T C A G C T C T G A A C T G G T A C A G T C
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T A C G T

PH0163.1_Six3/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGTATCACYAGCC
GATAGGGTATCACTAAT-
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G C T C T G A A C G T G T A C C G T A A G T C A G C T C T G A A C T G G T A C A G T C
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGTATCACYAGCC
GATGGGGTATCATTTTT-
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G C T C T G A A C G T G T A C C G T A A G T C A G C T C T G A A C T G G T A C A G T C
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTATCACYAGCC---
GANGTTAACTAGTTTNN
 A C G T A G C T A C T G A G C T C T G A A C G T G T A C C G T A A G T C A G C T C T G A A C T G G T A C A G T C A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGTATCACYAGCC
---GTCACATGAY
 A G C T A C T G A G C T C T G A A C G T G T A C C G T A A G T C A G C T C T G A A C T G G T A C A G T C
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGTATCACYAGCC
--GTTAACTAGN-
 A G C T A C T G A G C T C T G A A C G T G T A C C G T A A G T C A G C T C T G A A C T G G T A C A G T C
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGTATCACYAGCC
--GGTCACGTGG-
 A G C T A C T G A G C T C T G A A C G T G T A C C G T A A G T C A G C T C T G A A C T G G T A C A G T C
A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TGTATCACYAGCC
AATAGGGTATCATATAT-
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G C T C T G A A C G T G T A C C G T A A G T C A G C T C T G A A C T G G T A C A G T C
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T A C G T