Information for 18-TGGCMACTGCAAT (Motif 20)

A C G T A C T G A C T G A T G C G T A C G T C A G T A C A C G T T A C G T A G C G T C A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A T C G A T G C C G T A A C T G A C G T A C T G A T C G A G T C G T A C C G T A
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.813
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.3 +/- 26.9bp
Average Position of motif in Background68.3 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGGCMACTGCAAT---
----AGATGCAATCCC
 A C G T A C T G A C T G A T G C G T A C G T C A G T A C A C G T T A C G T A G C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGCMACTGCAAT---
AATCGCACTGCATTCCG
 A C G T A C G T A C T G A C T G A T G C G T A C G T C A G T A C A C G T T A C G T A G C G T C A C G T A A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGCMACTGCAAT
TTGGCA--------
 A C G T A C G T A C T G A C T G A T G C G T A C G T C A G T A C A C G T T A C G T A G C G T C A C G T A A C G T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCMACTGCAAT
NTTGGCANN------
 A C G T A C G T A C G T A C T G A C T G A T G C G T A C G T C A G T A C A C G T T A C G T A G C G T C A C G T A A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGCMACTGCAAT
CTTGGCAA-------
 A C G T A C G T A C G T A C T G A C T G A T G C G T A C G T C A G T A C A C G T T A C G T A G C G T C A C G T A A C G T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TGGCMACTGCAAT
NNTTGGCANN------
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C G T A C G T C A G T A C A C G T T A C G T A G C G T C A C G T A A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGGCMACTGCAAT----
--TTGAATGAAATTCGA
 A C G T A C T G A C T G A T G C G T A C G T C A G T A C A C G T T A C G T A G C G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGGCMACTGCAAT
SCCTAGCAACAG----
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C G T A C G T C A G T A C A C G T T A C G T A G C G T C A C G T A A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGGCMACTGCAAT
TGGCACGTGCCA-
 A C G T A C T G A C T G A T G C G T A C G T C A G T A C A C G T T A C G T A G C G T C A C G T A A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGGCMACTGCAAT--
TAAGCCACTTGAATTT
 A C G T A C G T A C T G A C T G A T G C G T A C G T C A G T A C A C G T T A C G T A G C G T C A C G T A A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T