Information for 6-RCAAATATTKGCY (Motif 2)

C T G A G T A C G T C A G T C A C G T A A G C T C G T A A C G T A C G T A C T G C T A G G T A C A G C T
Reverse Opposite:
C T G A A C T G A G T C G T A C C G T A C G T A C G A T C T G A C G A T A C G T C A G T C A T G G A C T
p-value:1e-18
log p-value:-4.148e+01
Information Content per bp:1.799
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets35.9 +/- 18.1bp
Average Position of motif in Background39.5 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---RCAAATATTKGCY
NNTNNCAATATTAG--
 A C G T A C G T A C G T C T G A G T A C G T C A G T C A C G T A A G C T C G T A A C G T A C G T A C T G C T A G G T A C A G C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---RCAAATATTKGCY
NNTNNCAATATTAG--
 A C G T A C G T A C G T C T G A G T A C G T C A G T C A C G T A A G C T C G T A A C G T A C G T A C T G C T A G G T A C A G C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.67
Offset:5
Orientation:forward strand
Alignment:RCAAATATTKGCY--
-----TRTTTACTTW
 C T G A G T A C G T C A G T C A C G T A A G C T C G T A A C G T A C G T A C T G C T A G G T A C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:RCAAATATTKGCY
--AATTATT----
 C T G A G T A C G T C A G T C A C G T A A G C T C G T A A C G T A C G T A C T G C T A G G T A C A G C T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:RCAAATATTKGCY--
----ATATTTACATA
 C T G A G T A C G T C A G T C A C G T A A G C T C G T A A C G T A C G T A C T G C T A G G T A C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:RCAAATATTKGCY--
----ATATTTACATA
 C T G A G T A C G T C A G T C A C G T A A G C T C G T A A C G T A C G T A C T G C T A G G T A C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

PB0197.1_Zfp105_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-RCAAATATTKGCY---
NAAANTTATTGAANCAN
 A C G T C T G A G T A C G T C A G T C A C G T A A G C T C G T A A C G T A C G T A C T G C T A G G T A C A G C T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RCAAATATTKGCY
AAACAAACATTC---
 A C G T A C G T C T G A G T A C G T C A G T C A C G T A A G C T C G T A A C G T A C G T A C T G C T A G G T A C A G C T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RCAAATATTKGCY--
---TTTGTTTACTTA
 C T G A G T A C G T C A G T C A C G T A A G C T C G T A A C G T A C G T A C T G C T A G G T A C A G C T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:RCAAATATTKGCY
-----TGTTTAC-
 C T G A G T A C G T C A G T C A C G T A A G C T C G T A A C G T A C G T A C T G C T A G G T A C A G C T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T